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C-terminal coiled-coil domain of transient receptor potential channel TRPP3 (PKD2L1, Polycystin-L)
Biology and Chemistry Report
4GIF
  •   Structure Details   Hide

    Structure Keywords

    Keywords TRANSPORT PROTEIN
    Text coiled-coil, trimer, TRP channel, transient receptor potential channel, polycystic kidney disease (PKD), membrane, TRANSPORT PROTEIN

    Polymeric Molecules

    Chain A
    Description Polycystic kidney disease 2-like 1 protein 
    Fragment UNP residues 699-743 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 5103.0 
    Source Method genetically manipulated  
    Entity Name Polycystin-2 homolog, Polycystin-2L1, Polycystin-L, Polycystin-L1 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A PK2L1_HUMAN O75972     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Gene pkd2l1, pkd2l, pkdl
    Host Scientific Name Escherichia coli  


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    10 10q24 9033     polycystic kidney disease 2-like 1 PKD2L1    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs138510953 LS-SNP   dbSNP   A 709 M - > V Helix 56% (Exposed) 10 102050159
    rs199920556 LS-SNP   dbSNP   A 729 D - > Y Helix 67% (Exposed) 10 102049837
    rs144617354 LS-SNP   dbSNP   A 740 R - > S Helix 65% (Exposed) 10 102049802