An Information Portal to 107620 Biological Macromolecular Structures

Crystal structure of Zucchini from mouse (mZuc / PLD6 / MitoPLD) bound to tungstate
Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Keywords HYDROLASE
    Text piRNA pathway, protein-RNA interactions, piRNA biogenesis, RNA interference, RNAi, HKD motif CCCH zinc finger, nuclease, nucleic acid binding, outer mitochondrial membrane, HYDROLASE

    Polymeric Molecules

    Chain A
    Description Mitochondrial cardiolipin hydrolase 
    Fragment Cytoplasmic domain, UNP residues 31-221 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 22343.0 
    Source Method genetically manipulated  
    Entity Name Choline phosphatase 6, Mitochondrial phospholipase, MitoPLD, Phosphatidylcholine-hydrolyzing phospholipase D6, Phospholipase D6, PLD 6 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    WO4  TUNGSTATE(VI)ION  O4 W   247.84  View 
    ZN  ZINC ION  Zn   65.41  View 
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A PLD6_MOUSE B7ZN71     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    8152   Metabolic Process  The Chemical Reactions and Pathways Including Anabolism and Catabolism by Which Living Organisms Transform Chemical Substances. Metabolic Processes Typically Transform Small Molecules But Also Include Macromolecular Processes Such As DNA Repair and Replication and Protein Synthesis and Degradation. 
    3824   Catalytic Activity  Catalysis of a Biochemical Reaction At Physiological Temperatures. in Biologically Catalyzed Reactions the Reactants Are Known As Substrates and the Catalysts Are Naturally Occurring Macromolecular Substances Known As Enzymes. Enzymes Possess Specific Binding Sites For Substrates and Are Usually Composed Wholly or Largely of Protein But RNA That Has Catalytic Activity (ribozyme) Is Often Also Regarded As Enzymatic. 

  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Mouse
    Scientific Name Mus musculus  
    Gene pld6
    Host Scientific Name Spodoptera frugiperda  
    Host Strain Sf9
    Host Vector Type Baculovirus
    Host Plasmid Name pFL

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    11 11|11 B1.3 194908     phospholipase D family, member 6 PLD6