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Structure of the Human Discs Large 1 PDZ2 - Adenomatous Polyposis Coli Cytoskeletal Polarity Complex
Biology and Chemistry Report
4G69
  •   Structure Details   Hide

    Structure Keywords

    Keywords MEMBRANE PROTEIN/SIGNALING PROTEIN
    Text PDZ, MAGUK, Polarity, Adenomatous Polyposis Coli, Tetramethylrhodamine, Adherens Junction, MEMBRANE PROTEIN-SIGNALING PROTEIN complex

    Polymeric Molecules

    Chain A
    Description Disks large homolog 1 
    Fragment PDZ2, UNP residues 310-407 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 10600.3 
    Source Method genetically manipulated  
    Entity Name Synapse-associated protein 97, SAP-97, SAP97, hDlg 
    Chain B
    Description Adenomatous polyposis coli protein 
    Fragment APC C-terminal peptide, UNP residues 2833-2843 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 1207.4 
    Source Method synthetic  
    Entity Name Protein APC, Deleted in polyposis 2.5 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A DLG1_HUMAN A5YKK7     
    B APC_HUMAN D3DT03     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Details Gst N Terminal Fusion Gst Cleaved Via Thrombin Treatment
    Gene dlg1
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3) Plyss
    Host Vector Type Plasmid
    Host Plasmid Name pGEX-2T


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    3 3q29 1739     discs, large homolog 1 (Drosophila) DLG1    
    5 5q21-q22 324     adenomatous polyposis coli APC    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs147695740 LS-SNP   dbSNP   A 347 S - > N Coil 15% (Intermediate) 3 196863492
    rs145398232 LS-SNP   dbSNP   A 376 N - > D Turn 99% (Exposed) 3 196857536
    rs151290819 LS-SNP   dbSNP   A 377 V - > I Beta Ladder 44% (Exposed) 3 196857533