Structural characterization of H-1 Parvovirus: comparison of infectious virions to replication defective particles
Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Keywords virus/dna
    Text Beta-barrel, ssDNA binding, ssDNA, icosahedral virus, virus, virus capsid protein, cell, virus-dna complex

    Polymeric Molecules

    Chain A
    Description Capsid protein VP1 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 81342.0 
    Source Method natural source  
    Entity Name Coat protein VP1 
    Chain C
    Description DNA (5'-D(P*CP*TP*GP*AP*CP*TP*TP*CP*AP*A)-3') 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 3004.0 
    Source Method natural source  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    CL  CHLORIDE ION  Cl   35.45  View 
    DC  2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE  C9 H14 N3 O7 P   307.20  View 
    EDO  1,2-ETHANEDIOL  C2 H6 O2   62.07  View 
    MG  MAGNESIUM ION  Mg   24.31  View 
    NA  SODIUM ION  Na   22.99  View 
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A CAPSD_PAVHH P03136     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

  •   Gene Details   Hide

    Natural Source

    Chain C
    Scientific Name H-1 parvovirus  
    Chain A
    Scientific Name H-1 parvovirus