POP-OUT | CLOSE

An Information Portal to 110790 Biological Macromolecular Structures

Dimeric Sec14 family homolog 3 from Saccharomyces cerevisiae presents some novel features of structure that lead to a surprising "dimer-monomer" state change induced by substrate binding
Biology and Chemistry Report
4FMM
  •   Structure Details   Hide

    Structure Keywords

    Keywords LIPID BINDING PROTEIN
    Text Sec14 domain, Phosphatidylinositol binding, signaling protein, LIPID BINDING PROTEIN

    Polymeric Molecules

    Chain A,B
    Description Phosphatidylinositol transfer protein PDR16 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 41988.7 
    Source Method genetically manipulated  
    Entity Name SEC14 homolog 3, PITP, Pleiotropic drug resistance protein 16 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    MG  MAGNESIUM ION  Mg   24.31  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B PDR16_YEAST P53860     

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    6810   Transport  The Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells or Within a Multicellular Organism by Means of Some Agent Such As a Transporter or Pore. 
    6869   Lipid Transport  The Directed Movement of Lipids Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. Lipids Are Compounds Soluble in an Organic Solvent But Not or Sparingly in an Aqueous Solvent. 
    8654   Phospholipid Biosynthetic Process  The Chemical Reactions and Pathways Resulting in the Formation of Phospholipids Any Lipid Containing Phosphoric Acid As a Mono or Diester. 
    15914   Phospholipid Transport  The Directed Movement of Phospholipids Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. Phospholipids Are Any Lipids Containing Phosphoric Acid As a Mono or Diester. 
    16126   Sterol Biosynthetic Process  The Chemical Reactions and Pathways Resulting in the Formation of Sterols Steroids with One or More Hydroxyl Groups and a Hydrocarbon Side Chain in the Molecule. 
    42493   Response to Drug  Any Process That Results in a Change in State or Activity of a Cell or an Organism (in Terms of Movement Secretion Enzyme Production Gene Expression Etc.) As a Result of a Drug Stimulus. a Drug Is a Substance Used in the Diagnosis Treatment or Prevention of a Disease. 
    43942   Negative Regulation of Sexual Sporulation Resulting in Formation of a Cellular Spore  Any Process That Stops Prevents or Reduces the Frequency Rate or Extent of the Formation of Cellular Spores Derived From the Products of Meiosis. 
    5783   Endoplasmic Reticulum  The Irregular Network of Unit Membranes Visible Only by Electron Microscopy That Occurs in the Cytoplasm of Many Eukaryotic Cells. the Membranes Form a Complex Meshwork of Tubular Channels Which Are Often Expanded Into Slitlike Cavities Called Cisternae. the Er Takes Two Forms Rough (or Granular) with Ribosomes Adhering to the Outer Surface and Smooth (with No Ribosomes Attached). 
    5789   Endoplasmic Reticulum Membrane  The Lipid Bilayer Surrounding the Endoplasmic Reticulum. 
    5811   Lipid Particle  An Intracellular Non Membrane Bounded Organelle Comprising a Matrix of Coalesced Lipids Surrounded by a Phospholipid Monolayer. May Include Associated Proteins. 
    16020   Membrane  A Lipid Bilayer Along with All the Proteins and Protein Complexes Embedded in It an Attached to It. 
    31090   Organelle Membrane  A Membrane That Is One of the Two Lipid Bilayers of an Organelle Envelope or the Outermost Membrane of Single Membrane Bound Organelle. 
    43231   Intracellular Membrane Bounded Organelle  Organized Structure of Distinctive Morphology and Function Bounded by a Single or Double Lipid Bilayer Membrane and Occurring Within the Cell. Includes the Nucleus Mitochondria Plastids Vacuoles and Vesicles. Excludes the Plasma Membrane. 
    71944   Cell Periphery  The Part of a Cell Encompassing the Cell Cortex the Plasma Membrane and Any External Encapsulating Structures. 
    8525   Phosphatidylcholine Transporter Activity  Enables the Directed Movement of Phosphatidylcholine Into Out of or Within a Cell or Between Cells. Phosphatidylcholine Refers to a Class of Glycerophospholipids in Which the Phosphatidyl Group Is Esterified to the Hydroxyl Group of Choline. 
    8526   Phosphatidylinositol Transporter Activity  Enables the Directed Movement of Phosphatidylinositol Into Out of or Within a Cell or Between Cells. Phosphatidylinositol Refers to Any Glycophospholipids with Its Sn Glycerol 3 Phosphate Residue Is Esterified to the 1 Hydroxyl Group of 1d Myo Inositol. 
    42802   Identical Protein Binding  Interacting Selectively and Non Covalently with an Identical Protein or Proteins. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Yeast
    Scientific Name Saccharomyces cerevisiae  
    Strain ATCC 204508 / S288C
    Gene n1158, pdr16, sfh3, ynl231c
    Host Scientific Name Escherichia coli  
    Host Strain Bl21
    Host Vector Type Plasmid
    Host Plasmid Name pET-22b


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    XIV - 855490     Pdr16p PDR16