POP-OUT | CLOSE
 
14-3-3 isoform zeta in complex with a diphoyphorylated C-RAF peptide
Biology and Chemistry Report
4FJ3
  •   Structure Details   Hide

    Structure Keywords

    Keywords PROTEIN BINDING/TRANSFERASE
    Text 14-3-3 fold, all alpha-helical, adapter protein, PROTEIN BINDING-TRANSFERASE complex

    Polymeric Molecules

    Chain A,B
    Description 14-3-3 protein zeta/delta 
    Fragment UNP residues 1-230 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 26720.4 
    Source Method genetically manipulated  
    Entity Name Protein kinase C inhibitor protein 1, KCIP-1 
    Chain P
    Description RAF proto-oncogene serine/threonine-protein kinase 
    Fragment UNP residues 229-264 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(L) 
    Formula Weight 4184.3 
    Source Method synthetic  
    Entity Name Proto-oncogene c-RAF, cRaf, Raf-1 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B 1433Z_HUMAN A8K1N0     
    P RAF1_HUMAN B0LPH8     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    2.7.11.1      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    5737   Cytoplasm  All of the Contents of a Cell Excluding the Plasma Membrane and Nucleus But Including Other Subcellular Structures. 
    42470   Melanosome  A Tissue Specific Membrane Bounded Cytoplasmic Organelle Within Which Melanin Pigments Are Synthesized and Stored. Melanosomes Are Synthesized in Melanocyte Cells. 
    5515   Protein Binding  Interacting Selectively and Non Covalently with Any Protein or Protein Complex (a Complex of Two or More Proteins That May Include Other Nonprotein Molecules). 
    8134   Transcription Factor Binding  Interacting Selectively and Non Covalently with a Transcription Factor Any Protein Required to Initiate or Regulate Transcription. 
    19901   Protein Kinase Binding  Interacting Selectively and Non Covalently with a Protein Kinase Any Enzyme That Catalyzes the Transfer of a Phosphate Group Usually From ATP to a Protein Substrate. 
    42802   Identical Protein Binding  Interacting Selectively and Non Covalently with an Identical Protein or Proteins. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Human
    Scientific Name Homo sapiens  
    Gene ywhaz
    Host Scientific Name Escherichia coli  


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    3 3p25 5894     Raf-1 proto-oncogene, serine/threonine kinase RAF1    
    8 8q23.1 7534     tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta YWHAZ    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs11551364 LS-SNP   dbSNP   A 22 M - > V Helix 0% (Buried) 8 101961054
    rs11551355 LS-SNP   dbSNP   A 27 K - > E Helix 30% (Intermediate) 8 101961039
    rs11551365 LS-SNP   dbSNP   A 76 Q - > R Helix 10% (Intermediate) 8 101960891
    rs137916988 LS-SNP   dbSNP   A 143 D - > N Helix 47% (Exposed) 8 101936518
    rs80338796 LS-SNP   dbSNP   P 257 S - > L Coil 15% (Intermediate) 3 12645699 SEP
    rs3730271 LS-SNP   dbSNP   P 259 S - > P Coil 25% (Intermediate) 3 12645694
    rs121434594 LS-SNP   dbSNP   P 261 P - > S Coil 46% (Exposed) 3 12645688 SEP