POP-OUT | CLOSE
 
Crystal Structure of WT MauG in Complex with Pre-Methylamine Dehydrogenase Aged 20 Days
Biology and Chemistry Report
4FA5
  •   Structure Details   Hide

    Structure Keywords

    Keywords Oxidoreductase/Electron transport
    Text tryptophan tryptophylquinone, Oxidoreductase-Electron Transfer complex, Oxidoreductase-Electron transport complex

    Polymeric Molecules

    Chain A,B
    Description Methylamine utilization protein MauG 
    Fragment unp residues 21-387 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 41147.1 
    Source Method genetically manipulated  
    Chain C,E
    Description Methylamine dehydrogenase light chain 
    Fragment unp residues 58-188 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(L) 
    Formula Weight 15025.7 
    Source Method genetically manipulated  
    Entity Name MADH, Methylamine dehydrogenase (amicyanin) 
    Chain D,F
    Description Methylamine dehydrogenase heavy chain 
    Fragment unp residues 33-417 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 42321.6 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    CA  CALCIUM ION  Ca   40.08  View 
    EDO  1,2-ETHANEDIOL  C2 H6 O2   62.07  View 
    HEC  HEME C  C34 H34 Fe N4 O4   618.50  View 
    MES  2-(N-MORPHOLINO)-ETHANESULFONIC ACID  C6 H13 N O4 S   195.24  View 
    NA  SODIUM ION  Na   22.99  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B MAUG_PARDP A1BBA3     
    C,E DHML_PARDE P22619     
    D,F A1BB97_PARDP A1BB97     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B  1      
    C E  1.4.9.1      
    D F  1.4.9.1      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    55114   Oxidation Reduction Process  A Metabolic Process That Results in the Removal or Addition of One or More Electrons to or From a Substance with or Without the Concomitant Removal or Addition of a Proton or Protons. 
    42597   Periplasmic Space  The Region Between the Inner (cytoplasmic) and Outer Membrane (gram Negative Bacteria) or Cytoplasmic Membrane and Cell Wall (fungi and Gram Positive Bacteria). 
    9055   Electron Carrier Activity  Any Molecular Entity That Serves As an Electron Acceptor and Electron Donor in an Electron Transport Chain. an Electron Transport Chain Is a Process in Which a Series of Electron Carriers Operate Together to Transfer Electrons From Donors to Any of Several Different Terminal Electron Acceptors to Generate a Transmembrane Electrochemical Gradient. 
    16491   Oxidoreductase Activity  Catalysis of an Oxidation Reduction (redox) Reaction a Reversible Chemical Reaction in Which the Oxidation State of an Atom or Atoms Within a Molecule Is Altered. One Substrate Acts As a Hydrogen or Electron Donor and Becomes Oxidized While the Other Acts As Hydrogen or Electron Acceptor and Becomes Reduced. 
    20037   Heme Binding  Interacting Selectively and Non Covalently with Heme Any Compound of Iron Complexed in a Porphyrin (tetrapyrrole) Ring. 
    46872   Metal Ion Binding  Interacting Selectively and Non Covalently with Any Metal Ion. 
    Chain C,E
    GO ID   Ontology GO Term Definition
    9308   Amine Metabolic Process  The Chemical Reactions and Pathways Involving Any Organic Compound That Is Weakly Basic in Character and Contains an Amino or a Substituted Amino Group As Carried Out by Individual Cells. Amines Are Called Primary Secondary or Tertiary According to Whether One Two or Three Carbon Atoms Are Attached to the Nitrogen Atom. 
    55114   Oxidation Reduction Process  A Metabolic Process That Results in the Removal or Addition of One or More Electrons to or From a Substance with or Without the Concomitant Removal or Addition of a Proton or Protons. 
    30288   Outer Membrane Bounded Periplasmic Space  The Region Between the Inner (cytoplasmic or Plasma) Membrane and Outer Membrane of Organisms with Two Membranes Such As Gram Negative Bacteria. These Periplasmic Spaces Are Relatively Thick and Contain a Thin Cell Wall. 
    42597   Periplasmic Space  The Region Between the Inner (cytoplasmic) and Outer Membrane (gram Negative Bacteria) or Cytoplasmic Membrane and Cell Wall (fungi and Gram Positive Bacteria). 
    16491   Oxidoreductase Activity  Catalysis of an Oxidation Reduction (redox) Reaction a Reversible Chemical Reaction in Which the Oxidation State of an Atom or Atoms Within a Molecule Is Altered. One Substrate Acts As a Hydrogen or Electron Donor and Becomes Oxidized While the Other Acts As Hydrogen or Electron Acceptor and Becomes Reduced. 
    16638   Oxidoreductase Activity Acting On the Ch Nh2 Group of Donors  Catalysis of an Oxidation Reduction (redox) Reaction in Which a Ch Nh2 Group Acts As a Hydrogen or Electron Donor and Reduces a Hydrogen or Electron Acceptor. 
    52876   Methylamine Dehydrogenase (amicyanin) Activity  Catalysis of the Reaction: Methylamine + H2o + Amicyanin = Formaldehyde + Ammonia + Reduced Amicyanin. 
    Chain D,F
    GO ID   Ontology GO Term Definition
    30416   Methylamine Metabolic Process  The Chemical Reactions and Pathways Involving Methylamine (ch3nh2). 
    55114   Oxidation Reduction Process  A Metabolic Process That Results in the Removal or Addition of One or More Electrons to or From a Substance with or Without the Concomitant Removal or Addition of a Proton or Protons. 
    42597   Periplasmic Space  The Region Between the Inner (cytoplasmic) and Outer Membrane (gram Negative Bacteria) or Cytoplasmic Membrane and Cell Wall (fungi and Gram Positive Bacteria). 
    16491   Oxidoreductase Activity  Catalysis of an Oxidation Reduction (redox) Reaction a Reversible Chemical Reaction in Which the Oxidation State of an Atom or Atoms Within a Molecule Is Altered. One Substrate Acts As a Hydrogen or Electron Donor and Becomes Oxidized While the Other Acts As Hydrogen or Electron Acceptor and Becomes Reduced. 
    30058   Amine Dehydrogenase Activity  Catalysis of the Reaction: R Ch2 Nh2 + H2o + Acceptor = R Cho + Nh3 + Reduced Acceptor. 
    52876   Methylamine Dehydrogenase (amicyanin) Activity  Catalysis of the Reaction: Methylamine + H2o + Amicyanin = Formaldehyde + Ammonia + Reduced Amicyanin. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain D,F
    Scientific Name Paracoccus denitrificans  
    Strain PD 1222
    Gene pden_4730
    Host Scientific Name Rhodobacter sphaeroides  


    Chain C,E
    Scientific Name Paracoccus denitrificans  
    Gene maua
    Host Scientific Name Rhodobacter sphaeroides  


    Chain A,B
    Scientific Name Paracoccus denitrificans  
    Strain PD 1222
    Gene maug, pden_4736
    Host Scientific Name Paracoccus denitrificans  


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    - - 4583239     di-haem cytochrome c peroxidase PDEN_4736