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Crystal structure of rat carnitine palmitoyltransferase 2 in complex with 1-[(R)-2-(3,4-Dihydro-1H-isoquinoline-2-carbonyl)-piperidin-1-yl]-2-phenoxy-ethanone
Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Keywords Transferase/Transferase Inhibitor
    Text ACYLTRANSFERASE, MITOCHONDRIAL PROTEIN, Transferase-Transferase Inhibitor complex

    Polymeric Molecules

    Chain A,B
    Description Carnitine O-palmitoyltransferase 2, mitochondrial 
    Fragment UNP residues 27-658 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 71533.6 
    Source Method genetically manipulated  
    Entity Name Carnitine palmitoyltransferase II, CPT II 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    L0R  1-[(2R)-2-(3,4-dihydroisoquinolin-2(1H)-ylcarbonyl)piperidin-1-yl]-2-phenoxyethanone  C23 H26 N2 O3   378.46  View 
    P6G  HEXAETHYLENE GLYCOL  C12 H26 O7   282.33  View 
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B CPT2_RAT P18886     

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    6629   Lipid Metabolic Process  The Chemical Reactions and Pathways Involving Lipids Compounds Soluble in an Organic Solvent But Not or Sparingly in an Aqueous Solvent. Includes Fatty Acids; Neutral Fats Other Fatty Acid Esters and Soaps; Long Chain (fatty) Alcohols and Waxes; Sphingoids and Other Long Chain Bases; Glycolipids Phospholipids and Sphingolipids; and Carotenes Polyprenols Sterols Terpenes and Other Isoprenoids. 
    6631   Fatty Acid Metabolic Process  The Chemical Reactions and Pathways Involving Fatty Acids Aliphatic Monocarboxylic Acids Liberated From Naturally Occurring Fats and Oils by Hydrolysis. 
    6635   Fatty Acid Beta Oxidation  A Fatty Acid Oxidation Process That Results in the Complete Oxidation of a Long Chain Fatty Acid. Fatty Acid Beta Oxidation Begins with the Addition of Coenzyme a to a Fatty Acid and Occurs by Successive Cycles of Reactions During Each of Which the Fatty Acid Is Shortened by a Two Carbon Fragment Removed As Acetyl Coenzyme A; the Cycle Continues Until Only Two or Three Carbons Remain (as Acetyl Coa or Propionyl Coa Respectively). 
    6810   Transport  The Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells or Within a Multicellular Organism by Means of Some Agent Such As a Transporter or Pore. 
    15909   Long Chain Fatty Acid Transport  The Directed Movement of Long Chain Fatty Acids Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. a Long Chain Fatty Acid Is a Fatty Acid with a Chain Length Between C13 and C22. 
    5739   Mitochondrion  A Semiautonomous Self Replicating Organelle That Occurs in Varying Numbers Shapes and Sizes in the Cytoplasm of Virtually All Eukaryotic Cells. It Is Notably the Site of Tissue Respiration. 
    5743   Mitochondrial Inner Membrane  The Inner I.e. Lumen Facing Lipid Bilayer of the Mitochondrial Envelope. It Is Highly Folded to Form Cristae. 
    16020   Membrane  A Lipid Bilayer Along with All the Proteins and Protein Complexes Embedded in It an Attached to It. 
    4095   Carnitine O Palmitoyltransferase Activity  Catalysis of the Reaction: Palmitoyl Coa + L Carnitine = Coa + L Palmitoylcarnitine. 
    16740   Transferase Activity  Catalysis of the Transfer of a Group E.g. a Methyl Group Glycosyl Group Acyl Group Phosphorus Containing or Other Groups From One Compound (generally Regarded As the Donor) to Another Compound (generally Regarded As the Acceptor). Transferase Is the Systematic Name For Any Enzyme of EC Class 2. 
    16746   Transferase Activity Transferring Acyl Groups  Catalysis of the Transfer of an Acyl Group From One Compound (donor) to Another (acceptor). 

  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Brown Rat Rat Rats
    Scientific Name Rattus norvegicus  
    Gene cpt2, cpt-2
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Vector Type Plasmid
    Host Plasmid Name PET28A

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    5 5q35 25413     carnitine palmitoyltransferase 2 CPT2