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Structure of BX-795 Complexed with Human TBK1 Kinase Domain Phosphorylated on Ser172
Biology and Chemistry Report
4EUU
  •   Structure Details   Hide

    Structure Keywords

    Keywords TRANSFERASE/TRANSFERASE INHIBITOR
    Text Kinase, ATP Binding, Phosphorylation, TRANSFERASE-TRANSFERASE INHIBITOR complex

    Polymeric Molecules

    Chain A,B
    Description Serine/threonine-protein kinase TBK1 
    Fragment Kinase Domain, UNP residues 2-308 
    Mutation D135N 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(L) 
    Formula Weight 36179.3 
    Source Method genetically manipulated  
    Entity Name NF-kappa-B-activating kinase, T2K, TANK-binding kinase 1 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    BX7  N-(3-{[5-iodo-4-({3-[(thiophen-2-ylcarbonyl)amino]propyl}amino)pyrimidin-2-yl]amino}phenyl)pyrrolidine-1-carboxamide  C23 H26 I N7 O2 S   591.47  View 
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    IOD  IODIDE ION  I   126.90  View 
    SO4  SULFATE ION  O4 S   96.06  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B TBK1_HUMAN A8K4S4     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B  2.7.11.1      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    6468   Protein Phosphorylation  The Process of Introducing a Phosphate Group On to a Protein. 
    4672   Protein Kinase Activity  Catalysis of the Phosphorylation of an Amino Acid Residue in a Protein Usually According to the Reaction: a Protein + ATP = a Phosphoprotein + Adp. 
    5524   ATP Binding  Interacting Selectively and Non Covalently with ATP Adenosine 5' Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    16772   Transferase Activity Transferring Phosphorus Containing Groups  Catalysis of the Transfer of a Phosphorus Containing Group From One Compound (donor) to Another (acceptor). 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Human
    Scientific Name Homo sapiens  
    Gene tbk1, nak
    Host Scientific Name Spodoptera frugiperda  


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    12 12q14.1 29110     TANK-binding kinase 1 TBK1    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs199822589 LS-SNP   dbSNP   A 12 S - > A Beta Ladder 23% (Intermediate) 12 64849684 BX7
    rs11538420 LS-SNP   dbSNP   A 45 F - > L 3/10 Helix 36% (Intermediate) 12 64854016
    rs139726614 LS-SNP   dbSNP   A 117 R - > Q Helix 41% (Exposed) 12 64858235
    rs200879808 LS-SNP   dbSNP   A 118 D - > N Helix 2% (Buried) 12 64858237
    rs41292021 LS-SNP   dbSNP   A 146 G - > A Coil 19% (Intermediate) 12 64860759
    rs55824172 LS-SNP   dbSNP   A 151 S - > F Beta Ladder 1% (Buried) 12 64860774
    rs202011771 LS-SNP   dbSNP   A 152 V - > L Beta Ladder 22% (Intermediate) 12 64860776
    rs200709730 LS-SNP   dbSNP   A 207 I - > T Helix 0% (Buried) 12 64868089
    rs149881816 LS-SNP   dbSNP   A 233 V - > L Helix 15% (Intermediate) 12 64868166
    rs56196591 LS-SNP   dbSNP   A 271 R - > Q Helix 52% (Exposed) 12 64873902
    rs34774243 LS-SNP   dbSNP   A 291 K - > E Turn 57% (Exposed) 12 64875680
    rs201970436 LS-SNP   dbSNP   A 306 L - > I Turn 33% (Intermediate) 12 64875725