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Crystal Structure of MBP-fused Human Six1 Bound to Human Eya2 Eya Domain
Biology and Chemistry Report
4EGC
  •   Structure Details   Hide

    Structure Keywords

    Keywords TRANSCRIPTION/HYDROLASE
    Text homeodomain (HD), six domain (SD), eya domain (ED), haloacid dehalogenase (HAD), transcription factor, co-activator, protein phosphatase, DNA binding, fusion protein, nucleus, TRANSCRIPTION-HYDROLASE complex

    Polymeric Molecules

    Chain A
    Description Maltose-binding periplasmic protein, Homeobox protein SIX1 chimera 
    Fragment SEE REMARK 999 
    Mutation E172A,N173A,E359A,K362A,D363A 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 62503.6 
    Source Method genetically manipulated  
    Entity Name MBP, MMBP, Maltodextrin-binding protein, Sine oculis homeobox homolog 1 
    Chain B
    Description Eyes absent homolog 2 
    Fragment Eya domain (UNP residues 253-538) 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 33026.6 
    Source Method genetically manipulated  
    Entity Name EYA2 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    MAL  MALTOSE  C12 H22 O11   342.30  View 
    MG  MAGNESIUM ION  Mg   24.31  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A MALE_ECOLI P0AEX9     
    A SIX1_HUMAN Q15475     
    B EYA2_HUMAN O00167     

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    3.1.3.48      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    6810   Transport  The Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells or Within a Multicellular Organism by Means of Some Agent Such As a Transporter or Pore. 
    6974   Cellular Response to DNA Damage Stimulus  Any Process That Results in a Change in State or Activity of a Cell (in Terms of Movement Secretion Enzyme Production Gene Expression Etc.) As a Result of a Stimulus Indicating Damage to Its DNA From Environmental Insults or Errors During Metabolism. 
    8643   Carbohydrate Transport  The Directed Movement of Carbohydrate Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. Carbohydrates Are Any of a Group of Organic Compounds Based of the General Formula Cx(h2o)y. 
    15768   Maltose Transport  The Directed Movement of Maltose Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. Maltose Is the Disaccharide 4 O Alpha D Glucopyranosyl D Glucopyranose an Intermediate in the Catabolism of Glycogen and Starch. 
    34289   Detection of Maltose Stimulus  The Series of Events in Which a Maltose Stimulus Is Received by a Cell and Converted Into a Molecular Signal. 
    42956   Maltodextrin Transport  The Directed Movement of Maltodextrin Any Polysaccharide of Glucose Residues in Beta (1 4) Linkage Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. 
    60326   Cell Chemotaxis  The Directed Movement of a Motile Cell Guided by a Specific Chemical Concentration Gradient. Movement May Be Towards a Higher Concentration (positive Chemotaxis) or Towards a Lower Concentration (negative Chemotaxis). 
    30288   Outer Membrane Bounded Periplasmic Space  The Region Between the Inner (cytoplasmic or Plasma) Membrane and Outer Membrane of Organisms with Two Membranes Such As Gram Negative Bacteria. These Periplasmic Spaces Are Relatively Thick and Contain a Thin Cell Wall. 
    42597   Periplasmic Space  The Region Between the Inner (cytoplasmic) and Outer Membrane (gram Negative Bacteria) or Cytoplasmic Membrane and Cell Wall (fungi and Gram Positive Bacteria). 
    43190   ATP Binding Cassette (abc) Transporter Complex  A Complex For the Transport of Metabolites Into and Out of the Cell Typically Comprised of Four Domains; Two Membrane Associated Domains and Two ATP Binding Domains At the Intracellular Face of the Membrane That Form a Central Pore Through the Plasma Membrane. Each of the Four Core Domains May Be Encoded As a Separate Polypeptide or the Domains Can Be Fused in Any One of a Number of Ways Into Multidomain Polypeptides. in Bacteria and Archaebacteria Abc Transporters Also Include Substrate Binding Proteins to Bind Substrate External to the Cytoplasm and Deliver It to the Transporter. 
    55052   ATP Binding Cassette (abc) Transporter Complex Substrate Binding Subunit Containing  A Complex For the Transport of Metabolites Into the Cell Consisting of 5 Subunits: Two ATP Binding Subunits Two Membrane Spanning Subunits and One Substrate Binding Subunit. in Organisms with Two Membranes the Substrate Binding Protein Moves Freely in the Periplasmic Space and Joins the Other Subunits Only When Bound with Substrate. in Organisms with Only One Membrane the Substrate Binding Protein Is Tethered to the Cytoplasmic Membrane and Associated with the Other Subunits. Transport of the Substrate Across the Membrane Is Driven by the Hydrolysis of Atp. 
    1990060   Maltose Transport Complex  Protein Complex Facilitating ATP Dependent Maltose Transport Through Inner Cell Membrane (periplasm to Cytoplasm) in Gram Negative Bacteria. in E. Coli the System Is Composed of a Periplasmic Maltose Binding Protein (mbp) Two Integral Membrane Proteins Malf and Malg and Two Copies of the Cytoplasmic ATP Binding Cassette Malk. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 
    5215   Transporter Activity  Enables the Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells. 
    5363   Maltose Transmembrane Transporter Activity  Enables the Transfer of Maltose From One Side of the Membrane to the Other. Maltose Is the Disaccharide 4 O Alpha D Glucopyranosyl D Glucopyranose an Intermediate in the Enzymatic Breakdown of Glycogen and Starch. 
    5515   Protein Binding  Interacting Selectively and Non Covalently with Any Protein or Protein Complex (a Complex of Two or More Proteins That May Include Other Nonprotein Molecules). 
    1901982   Maltose Binding  Interacting Selectively and Non Covalently with Maltose. 
    Chain B
    GO ID   Ontology GO Term Definition
    7275   Multicellular Organismal Development  The Biological Process Whose Specific Outcome Is the Progression of a Multicellular Organism Over Time From an Initial Condition (e.g. a Zygote or a Young Adult) to a Later Condition (e.g. a Multicellular Animal or an Aged Adult). 
    14706   Striated Muscle Tissue Development  The Process Whose Specific Outcome Is the Progression of a Striated Muscle Over Time From Its Formation to the Mature Structure. Striated Muscle Contain Fibers That Are Divided by Transverse Bands Into Striations and Cardiac and Skeletal Muscle Are Types of Striated Muscle. Skeletal Muscle Myoblasts Fuse to Form Myotubes and Eventually Multinucleated Muscle Fibers. the Fusion of Cardiac Cells Is Very Rare and Can Only Form Binucleate Cells. 
    4725   Protein Tyrosine Phosphatase Activity  Catalysis of the Reaction: Protein Tyrosine Phosphate + H2o = Protein Tyrosine + Phosphate. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain B
    Common Name Human
    Scientific Name Homo sapiens  
    Gene eab1, eya2
    Host Scientific Name Escherichia coli  
    Host Strain Xa 90
    Host Vector Type Plasmid
    Host Plasmid Name pGEX-6P-1


    Chain A
    Common Name Human
    Scientific Name Escherichia coli, homo sapiens  
    Gene b4034, jw3994, male, mbp, six1
    Host Scientific Name Escherichia coli  
    Host Strain Xa 90
    Host Vector Type Plasmid
    Host Plasmid Name PMALX_B


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    14 14q23.1 6495     SIX homeobox 1 SIX1    
    20 20q13.1 2139     EYA transcriptional coactivator and phosphatase 2 EYA2