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The crystal structure of uPA in complex with the Fab fragment of mAb-112
Biology and Chemistry Report
4DW2
  •   Structure Details   Hide

    Structure Keywords

    Keywords HYDROLASE/IMMUNE SYSTEM
    Text urokinase-type plasminogen activator, antibody, serine protease, zymogen, HYDROLASE-IMMUNE SYSTEM complex

    Polymeric Molecules

    Chain U
    Description Urokinase-type plasminogen activator 
    Fragment catalytic domain, UNP RESIDUES 179-424 
    Mutation C122A, N145Q 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 27715.8 
    Source Method genetically manipulated  
    Entity Name Urokinase-type plasminogen activator chain B 
    Chain H
    Description Fab fragment of pro-uPA antibody mAb-112 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 22889.9 
    Source Method natural source  
    Chain L
    Description Fab fragment of pro-uPA antibody mAb-112 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 23600.2 
    Source Method natural source  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    SO4  SULFATE ION  O4 S   96.06  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    U UROK_HUMAN P00749     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    3.4.21.73      

    Immune Epitopes (B-cell and T-Cell)

    Immune Epitope Database (IEDB)
    Epitope ID 179941    
     
  •   Gene Details   Hide

    Natural Source

    Chain L
    Scientific Name Mus musculus  
    Chain H
    Scientific Name Mus musculus  

    Genetic Source

    Chain U
    Common Name Human
    Scientific Name Homo sapiens  
    Gene plau
    Host Scientific Name Pichia pastoris  
    Host Strain X33
    Host Vector Type Plasmid
    Host Plasmid Name pPICZaA


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    10 10q22.2 5328     plasminogen activator, urokinase PLAU