POP-OUT | CLOSE

An Information Portal to 105339 Biological Macromolecular Structures

The crystal structure of human urokinase-type plasminogen activator catalytic domain
Biology and Chemistry Report
4DVA
  •   Structure Details   Hide

    Structure Keywords

    Keywords Hydrolase
    Text Hydrolase, Plasminogen activation, Protease, Serine protease

    Polymeric Molecules

    Chain U
    Description Urokinase-type plasminogen activator 
    Fragment catalytic domain 
    Mutation C122A, N145Q 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 27715.8 
    Source Method genetically manipulated  
    Entity Name U-plasminogen activator, uPA 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    P6G  HEXAETHYLENE GLYCOL  C12 H26 O7   282.33  View 
    SO4  SULFATE ION  O4 S   96.06  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    U UROK_HUMAN P00749     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    3.4.21.73      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain U
    GO ID   Ontology GO Term Definition
    6508   Proteolysis  The Hydrolysis of Proteins Into Smaller Polypeptides And/or Amino Acids by Cleavage of Their Peptide Bonds. 
    3824   Catalytic Activity  Catalysis of a Biochemical Reaction At Physiological Temperatures. in Biologically Catalyzed Reactions the Reactants Are Known As Substrates and the Catalysts Are Naturally Occurring Macromolecular Substances Known As Enzymes. Enzymes Possess Specific Binding Sites For Substrates and Are Usually Composed Wholly or Largely of Protein But RNA That Has Catalytic Activity (ribozyme) Is Often Also Regarded As Enzymatic. 
    4252   Serine Type Endopeptidase Activity  Catalysis of the Hydrolysis of Internal Alpha Peptide Bonds in a Polypeptide Chain by a Catalytic Mechanism That Involves a Catalytic Triad Consisting of a Serine Nucleophile That Is Activated by a Proton Relay Involving an Acidic Residue (e.g. Aspartate or Glutamate) and a Basic Residue (usually Histidine). 


     
  •   Gene Details   Hide

    Genetic Source

    Chain U
    Common Name Human
    Scientific Name Homo sapiens  
    Gene plau
    Host Scientific Name Pichia pastoris  
    Host Strain X33
    Host Vector Type Plasmid
    Host Plasmid Name pPICZaA


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    10 10q22.2 5328     plasminogen activator, urokinase PLAU