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Structure of malonyl-coenzyme A reductase from crenarchaeota in complex with NadP
Biology and Chemistry Report
4DPL
  •   Structure Details   Hide

    Structure Keywords

    Keywords oxidoreductase
    Text dinucleotide binding, dimerization domain, reductase, NadP, CoA, oxidoreductase

    Polymeric Molecules

    Chain A,B,C,D
    Description Malonyl-CoA/succinyl-CoA reductase 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 39610.1 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    NAP  NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE  C21 H28 N7 O17 P3   743.41  View 
    UNL  Unknown ligand  n/a   0.00  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C,D MCR_SULTO Q96YK1     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B C D  1.2.1.75      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C,D
    GO ID   Ontology GO Term Definition
    6531   Aspartate Metabolic Process  The Chemical Reactions and Pathways Involving Aspartate the Anion Derived From Aspartic Acid 2 Aminobutanedioic Acid. 
    8652   Cellular Amino Acid Biosynthetic Process  The Chemical Reactions and Pathways Resulting in the Formation of Amino Acids Organic Acids Containing One or More Amino Substituents. 
    9086   Methionine Biosynthetic Process  The Chemical Reactions and Pathways Resulting in the Formation of Methionine (2 Amino 4 (methylthio)butanoic Acid) a Sulfur Containing Essential Amino Acid Found in Peptide Linkage in Proteins. 
    9088   Threonine Biosynthetic Process  The Chemical Reactions and Pathways Resulting in the Formation of Threonine (2 Amino 3 Hydroxybutyric Acid) a Polar Uncharged Essential Amino Acid Found in Peptide Linkage in Proteins. 
    9089   Lysine Biosynthetic Process Via Diaminopimelate  The Chemical Reactions and Pathways Resulting in the Formation of Lysine Via the Intermediate Diaminopimelate. 
    9097   Isoleucine Biosynthetic Process  The Chemical Reactions and Pathways Resulting in the Formation of Isoleucine (2r* 3r*) 2 Amino 3 Methylpentanoic Acid. 
    55114   Oxidation Reduction Process  A Metabolic Process That Results in the Removal or Addition of One or More Electrons to or From a Substance with or Without the Concomitant Removal or Addition of a Proton or Protons. 
    5737   Cytoplasm  All of the Contents of a Cell Excluding the Plasma Membrane and Nucleus But Including Other Subcellular Structures. 
    3723   RNA Binding  Interacting Selectively and Non Covalently with an RNA Molecule or a Portion Thereof. 
    3942   N Acetyl Gamma Glutamyl Phosphate Reductase Activity  Catalysis of the Reaction: N Acetyl L Glutamate 5 Semialdehyde + Nadp+ + Phosphate = N Acetyl 5 Glutamyl Phosphate + Nadph + H+. 
    4073   Aspartate Semialdehyde Dehydrogenase Activity  Catalysis of the Reaction: L Aspartate 4 Semialdehyde + Nadp(+) + Phosphate = 4 Phospho L Aspartate + H(+) + Nadph. 
    16491   Oxidoreductase Activity  Catalysis of an Oxidation Reduction (redox) Reaction a Reversible Chemical Reaction in Which the Oxidation State of an Atom or Atoms Within a Molecule Is Altered. One Substrate Acts As a Hydrogen or Electron Donor and Becomes Oxidized While the Other Acts As Hydrogen or Electron Acceptor and Becomes Reduced. 
    16620   Oxidoreductase Activity Acting On the Aldehyde or Oxo Group of Donors NAD or Nadp As Acceptor  Catalysis of an Oxidation Reduction (redox) Reaction in Which an Aldehyde or Ketone (oxo) Group Acts As a Hydrogen or Electron Donor and Reduces NAD or Nadp. 
    46983   Protein Dimerization Activity  The Formation of a Protein Dimer a Macromolecular Structure Consists of Two Noncovalently Associated Identical or Nonidentical Subunits. 
    50661   Nadp Binding  Interacting Selectively and Non Covalently with Nicotinamide Adenine Dinucleotide Phosphate a Coenzyme Involved in Many Redox and Biosynthetic Reactions; Binding May Be to Either the Oxidized Form Nadp+ or the Reduced Form Nadph. 
    51287   NAD Binding  Interacting Selectively and Non Covalently with Nicotinamide Adenine Dinucleotide a Coenzyme Involved in Many Redox and Biosynthetic Reactions; Binding May Be to Either the Oxidized Form Nad+ or the Reduced Form Nadh. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C,D
    Scientific Name Sulfolobus tokodaii  
    Strain DSM 16993 / JCM 10545 / NBRC 100140 / 7
    Gene mcr/scr, stk_21710
    Host Scientific Name Escherichia coli  


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    - - 1460244     aspartate-semialdehyde dehydrogenase ST2171