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Crystal structure of red kidney bean purple acid phosphatase in complex with Maybridge fragment MO07123
Biology and Chemistry Report
4DHL
  •   Structure Details   Hide

    Structure Keywords

    Keywords HYDROLASE
    Text Catalytic C domain, N terminal domain, Phosphatase, Acid Phosphatase, Phosphoric Monoester Hydrolases, Hydrolase, MO07123, Maybridge, Fragment, lysosome

    Polymeric Molecules

    Chain A,B,C,D
    Description Purple acid phosphatase 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 49555.9 
    Source Method natural source  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    0K7  2-(4-methylphenyl)-1,3-thiazole-4-carboxylic acid  C11 H9 N O2 S   219.26  View 
    EDO  1,2-ETHANEDIOL  C2 H6 O2   62.07  View 
    FE  FE (III) ION  Fe   55.85  View 
    FUC  ALPHA-L-FUCOSE  C6 H12 O5   164.16  View 
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    NAG  N-ACETYL-D-GLUCOSAMINE  C8 H15 N O6   221.21  View 
    SO4  SULFATE ION  O4 S   96.06  View 
    ZN  ZINC ION  Zn   65.41  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C,D O24319_PHAVU O24319     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B C D  3.1.3.2      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C,D
    GO ID   Ontology GO Term Definition
    8152   Metabolic Process  The Chemical Reactions and Pathways Including Anabolism and Catabolism by Which Living Organisms Transform Chemical Substances. Metabolic Processes Typically Transform Small Molecules But Also Include Macromolecular Processes Such As DNA Repair and Replication and Protein Synthesis and Degradation. 
    16311   Dephosphorylation  The Process of Removing One or More Phosphoric (ester or Anhydride) Residues From a Molecule. 
    3993   Acid Phosphatase Activity  Catalysis of the Reaction: an Orthophosphoric Monoester + H2o = an Alcohol + Phosphate with an Acid Ph Optimum. 
    16787   Hydrolase Activity  Catalysis of the Hydrolysis of Various Bonds E.g. C O C N C C Phosphoric Anhydride Bonds Etc. Hydrolase Is the Systematic Name For Any Enzyme of EC Class 3. 
    46872   Metal Ion Binding  Interacting Selectively and Non Covalently with Any Metal Ion. 


     
  •   Gene Details   Hide

    Natural Source

    Chain A,B,C,D
    Common Name French Bean Kidney Bean String Bean
    Scientific Name Phaseolus vulgaris