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Structure of mouse DNMT1 (731-1602) bound to hemimethylated CpG DNA
Biology and Chemistry Report
4DA4
  •   Structure Details   Hide

    Structure Keywords

    Keywords Transferase/DNA
    Text Maintenance DNA methylation, Covalent Complex, Transferase-DNA complex

    Polymeric Molecules

    Chain A,B
    Description DNA (cytosine-5)-methyltransferase 1 
    Fragment UNP residues 731-1602 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 98981.3 
    Source Method genetically manipulated  
    Entity Name Dnmt1, Met-1, DNA methyltransferase MmuI, DNA MTase MmuI, M.MmuI, MCMT 
    Chain C,E
    Description DNA_UPPER_STRAND 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 3678.4 
    Source Method synthetic  
    Chain D,F
    Description DNA_LOWER_STRAND 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 3728.5 
    Source Method synthetic  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    CIT  CITRIC ACID  C6 H8 O7   192.12  View 
    SAH  S-ADENOSYL-L-HOMOCYSTEINE  C14 H20 N6 O5 S   384.41  View 
    ZN  ZINC ION  Zn   65.41  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B DNMT1_MOUSE P13864     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B  2.1.1.37      

    Protein Analyses

    Measured Binding Affinities   

     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Mouse
    Scientific Name Mus musculus  
    Gene dnmt1, dnmt, met1, uim
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)ril


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    9 9 A3|9 7.66 cM 13433     DNA methyltransferase (cytosine-5) 1 DNMT1