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Structure of Thermus thermophilus 30s ribosome
Biology and Chemistry Report
4BYB
  •   Structure Details   Hide

    Structure Keywords

    Keywords RIBOSOME
    Text RIBOSOME, TOXIN-ANTITOXIN, RIBOSOME-DEPENDENT NUCLEASE, MRNA DEGRADATION, TRANSLATION REGULATION

    Polymeric Molecules

    Chain A
    Description RNA (1504-MER) 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polyribonucleotide 
    Formula Weight 488391.0 
    Source Method synthetic  
    Chain J
    Description 30S RIBOSOMAL PROTEIN S10 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 11955.0 
    Source Method natural source  
    Chain K
    Description 30S RIBOSOMAL PROTEIN S11 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 13737.9 
    Source Method natural source  
    Chain L
    Description 30S RIBOSOMAL PROTEIN S12 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 14637.4 
    Source Method natural source  
    Chain M
    Description 30S RIBOSOMAL PROTEIN S13 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 14338.9 
    Source Method natural source  
    Chain N
    Description 30S RIBOSOMAL PROTEIN S14 TYPE Z 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 7158.7 
    Source Method natural source  
    Chain O
    Description 30S RIBOSOMAL PROTEIN S15 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 10578.4 
    Source Method natural source  
    Chain P
    Description 30S RIBOSOMAL PROTEIN S16 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 10410.0 
    Source Method natural source  
    Chain Q
    Description 30S RIBOSOMAL PROTEIN S17 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 12325.7 
    Source Method natural source  
    Chain R
    Description 30S RIBOSOMAL PROTEIN S18 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 10258.3 
    Source Method natural source  
    Chain S
    Description 30S RIBOSOMAL PROTEIN S19 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 10605.5 
    Source Method natural source  
    Chain B
    Description 30S RIBOSOMAL PROTEIN S2 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 29317.7 
    Source Method natural source  
    Chain T
    Description 30S RIBOSOMAL PROTEIN S20 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 11736.1 
    Source Method natural source  
    Chain U
    Description 30S RIBOSOMAL PROTEIN THX 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 3350.0 
    Source Method natural source  
    Chain V
    Description RNA (77-MER) 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polyribonucleotide 
    Formula Weight 24816.8 
    Source Method synthetic  
    Chain W
    Description RNA (77-MER) 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polyribonucleotide 
    Formula Weight 24802.8 
    Source Method synthetic  
    Chain X
    Description 5'-R(*GP*GP*CP*AP*AP*GP*GP*AP*GP*GP*UP*AP*AP*AP *AP*AP*UP*G U2M A2M A2MP*AP*AP*AP*A)-3' 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polyribonucleotide 
    Formula Weight 8246.1 
    Source Method synthetic  
    Chain Y,Z
    Description TOXIN OF THE YOEB-YEFM TOXIN-ANTITOXIN SYSTEM 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 10233.7 
    Source Method genetically manipulated  
    Entity Name TOXIN RELE 
    Chain C
    Description 30S RIBOSOMAL PROTEIN S3 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 26751.1 
    Source Method natural source  
    Chain D
    Description 30S RIBOSOMAL PROTEIN S4 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 24373.4 
    Source Method natural source  
    Chain E
    Description 30S RIBOSOMAL PROTEIN S5 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 17583.4 
    Source Method natural source  
    Chain F
    Description 30S RIBOSOMAL PROTEIN S6 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 11988.8 
    Source Method natural source  
    Entity Name TS9 
    Chain G
    Description 30S RIBOSOMAL PROTEIN S7 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 18051.0 
    Source Method natural source  
    Chain H
    Description 30S RIBOSOMAL PROTEIN S8 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 15868.6 
    Source Method natural source  
    Chain I
    Description 30S RIBOSOMAL PROTEIN S9 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 14410.6 
    Source Method natural source  

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)

     
  •   Gene Details   Hide

    Natural Source

    Chain W
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain V
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain U
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain T
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain S
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain R
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain Q
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain P
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain O
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain N
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain M
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain A
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Details 70s Ribosomes Purified From T. Thermophilus
    Chain B
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain C
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain D
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain E
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain F
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain G
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain H
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain I
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain J
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain K
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634
    Chain L
    Scientific Name Thermus thermophilus  
    Strain HB8
    ATCC Source 27634

    Genetic Source

    Chain Y,Z
    Scientific Name Escherichia coli  
    Strain K-12
    Gene b1563, jw1555, rele
    Host Scientific Name Escherichia coli  
    Host Strain Bl21
    Host Vector Type Pqe


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    - - 3168024     30S ribosomal protein S11 TTHA1666    
    - - 3167962     30S ribosomal protein S13 RPSM    
    - - 3170114     30S ribosomal protein S16 RPSP    
    - - 3169831     30S ribosomal protein S17 RPSQ    
    - - 3169870     30S ribosomal protein S18 RPSR    
    - - 3168087     30S ribosomal protein S20 RPST    
    - - 3170121     30S ribosomal protein S2 RPSB    
    - - 3168725     30S ribosomal protein S3 RPSC    
    - - 3168006     30S ribosomal protein S4 RPSD    
    - - 3167931     30S ribosomal protein S7 TTHA1696    
    - - 3169752     30S ribosomal protein S9 RPSI