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H5 (VN1194) Influenza Virus Haemagglutinin in Complex with Avian Receptor Analogue 3'-SLN
Biology and Chemistry Report
4BGY
  •   Structure Details   Hide

    Structure Keywords

    Keywords VIRAL PROTEIN
    Text VIRAL PROTEIN, N-GLYCOSYLATION, VIRUS RECEPTOR, BIRD FLU

    Polymeric Molecules

    Chain A
    Description HEMAGGLUTININ 
    Fragment HA1 OF TRYPSIN RELEASED ECTODOMAIN, RESIDUES 17-340 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 36951.1 
    Source Method natural source  
    Entity Name HAEMAGGLUTININ HA1 
    Chain B
    Description HEMAGGLUTININ 
    Fragment HA2 OF TRYPSIN RELEASED ECTODOMAIN, RESIDUES 347-512 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 19098.1 
    Source Method natural source  
    Entity Name HAEMAGGLUTININ HA2 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    EPE  4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID  C8 H18 N2 O4 S   238.31  View 
    GAL  BETA-D-GALACTOSE  C6 H12 O6   180.16  View 
    NAG  N-ACETYL-D-GLUCOSAMINE  C8 H15 N O6   221.21  View 
    SIA  O-SIALIC ACID  C11 H19 N O9   309.27  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A Q6DQ34_9INFA Q6DQ34     
    B Q6DQ34_9INFA Q6DQ34     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    19064   Fusion of Virus Membrane with Host Plasma Membrane  Fusion of a Viral Membrane with the Host Cell Membrane During Viral Entry. Results in Release of the Virion Contents Into the Cytoplasm. 
    19031   Viral Envelope  The Lipid Bilayer of a Virion That Surrounds the Protein Capsid. May Also Contain Glycoproteins. 
    46789   Host Cell Surface Receptor Binding  Interacting Selectively and Non Covalently with a Receptor On the Host Cell Surface. 
    Chain B
    GO ID   Ontology GO Term Definition
    19064   Fusion of Virus Membrane with Host Plasma Membrane  Fusion of a Viral Membrane with the Host Cell Membrane During Viral Entry. Results in Release of the Virion Contents Into the Cytoplasm. 
    19031   Viral Envelope  The Lipid Bilayer of a Virion That Surrounds the Protein Capsid. May Also Contain Glycoproteins. 
    46789   Host Cell Surface Receptor Binding  Interacting Selectively and Non Covalently with a Receptor On the Host Cell Surface. 


     
  •   Gene Details   Hide

    Natural Source

    Chain B
    Scientific Name Influenza virus  
    Strain A/VIETNAM/1194/2004 (H5N1)
    Variant A/vn/1194/04/nibrg14 Vaccine Strain
    Details The National Institute For Biological Standards and Control (nibsc)
    Chain A
    Scientific Name Influenza virus  
    Strain A/VIETNAM/1194/2004 (H5N1)
    Variant A/vn/1194/04/nibrg14 Vaccine Strain
    Details The National Institute For Biological Standards and Control (nibsc)