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Structure of the atypical C1 domain of MgcRacGAP
Biology and Chemistry Report
4B6D
  •   Structure Details   Hide

    Structure Keywords

    Keywords SIGNALING PROTEIN
    Text SIGNALING PROTEIN, CYTOKINESIS, PLASMA MEMBRANE, PHOSPHOLIPIDS, CENTRALSPINDLIN, SPINDLE MIDZONE, CENTRAL SPINDLE, MIDBODY

    Polymeric Molecules

    Chain A,B,C,D,E,F
    Description RAC GTPASE-ACTIVATING PROTEIN 1 
    Fragment C1 DOMAIN, RESIDUES 284-339 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 6823.3 
    Source Method genetically manipulated  
    Entity Name MALE GERM CELL RACGAP, MGCRACGAP, PROTEIN CYK4 HOMOLG, CYK4, HSCYK-4 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    ZN  ZINC ION  Zn   65.41  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C,D,E,F RGAP1_HUMAN Q6PJ26     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C,D,E,F
    GO ID   Ontology GO Term Definition
    35556   Intracellular Signal Transduction  The Process in Which a Signal Is Passed On to Downstream Components Within the Cell Which Become Activated Themselves to Further Propagate the Signal and Finally Trigger a Change in the Function or State of the Cell. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C,D,E,F
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Escherichia coli  
    Host Variant Codon Plus Ril
    Host Strain Bl21 (de3)
    Host Vector Pgex 6p 1
    Host Plasmid Name PGEX-C1WT


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    12 12q13.12 29127     Rac GTPase activating protein 1 RACGAP1    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs201577423 LS-SNP   dbSNP   A 311 K - > R Coil 60% (Exposed) 12 50390935
    rs138973893 LS-SNP   dbSNP   A 315 K - > R Beta Ladder 41% (Exposed) 12 50390923