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Crystal structure of the Rubella virus glycoprotein E1 in its post-fusion form crystallized in presence of 20mM of Calcium Acetate
Biology and Chemistry Report
4B3V
  •   Structure Details   Hide

    Structure Keywords

    Keywords VIRAL PROTEIN
    Text VIRAL PROTEIN, ENVELOPE GLYCOPROTEIN, MEMBRANE FUSION

    Polymeric Molecules

    Chain A,B,C
    Description E1 ENVELOPE GLYCOPROTEIN 
    Fragment ECTODOMAIN, RESIDUES 583-1018 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 50573.9 
    Source Method genetically manipulated  
    Entity Name ENVELOPE GLYCOPROTEIN E1 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    ACT  ACETATE ION  C2 H3 O2   59.04  View 
    CA  CALCIUM ION  Ca   40.08  View 
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    NA  SODIUM ION  Na   22.99  View 
    NAG  N-ACETYL-D-GLUCOSAMINE  C8 H15 N O6   221.21  View 
    NGA  N-ACETYL-D-GALACTOSAMINE  C8 H15 N O6   221.21  View 
    PEG  DI(HYDROXYETHYL)ETHER  C4 H10 O3   106.12  View 
    PG4  TETRAETHYLENE GLYCOL  C8 H18 O5   194.23  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C POLS_RUBVM P08563     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C
    GO ID   Ontology GO Term Definition
    16021   Integral Component of Membrane  The Component of a Membrane Consisting of Gene Products and Protein Complexes That Have Some Part That Penetrates At Least One Leaflet of the Membrane Bilayer. This Component Includes Gene Products That Are Buried in the Bilayer with No Exposure Outside the Bilayer. 
    19013   Viral Nucleocapsid  The Complete Protein Nucleic Acid Complex That Is the Packaged Form of the Genome in a Virus Particle. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C
    Scientific Name Rubella virus  
    Strain M33
    Host Common Name Fruit Fly
    Host Scientific Name Drosophila melanogaster  
    Host Cell Line Schneider 2
    Host Strain Plasmid
    Host Vector Type Plasmid
    Host Plasmid Name PMT MODIFIED INVITROGEN