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Humanised monomeric RadA in complex with FHTA tetrapeptide
Biology and Chemistry Report
4B3B
  •   Structure Details   Hide

    Structure Keywords

    Keywords HYDROLASE/PEPTIDE
    Text HYDROLASE-PEPTIDE COMPLEX, RECOMBINASE, THERMOSTABLE, HUMANISED, PEPTIDE-BINDING

    Polymeric Molecules

    Chain A
    Description DNA REPAIR AND RECOMBINATION PROTEIN RADA 
    Fragment ATPASE, RESIDUES 108-287,300-349 
    Mutation YES 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 25502.3 
    Source Method genetically manipulated  
    Chain C
    Description FHTA TETRAPEPTIDE 
    Fragment FRAGMENT OF BRC4 REPEAT OF BRCA2 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(L) 
    Formula Weight 499.6 
    Source Method synthetic  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    PO4  PHOSPHATE ION  O4 P   94.97  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A RADA_PYRFU O74036     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    6259   DNA Metabolic Process  Any Cellular Metabolic Process Involving Deoxyribonucleic Acid. This Is One of the Two Main Types of Nucleic Acid Consisting of a Long Unbranched Macromolecule Formed From One or More Commonly Two Strands of Linked Deoxyribonucleotides. 
    6281   DNA Repair  The Process of Restoring DNA After Damage. Genomes Are Subject to Damage by Chemical and Physical Agents in the Environment (e.g. Uv and Ionizing Radiations Chemical Mutagens Fungal and Bacterial Toxins Etc.) and by Free Radicals or Alkylating Agents Endogenously Generated in Metabolism. DNA Is Also Damaged Because of Errors During Its Replication. a Variety of Different DNA Repair Pathways Have Been Reported That Include Direct Reversal Base Excision Repair Nucleotide Excision Repair Photoreactivation Bypass Double Strand Break Repair Pathway and Mismatch Repair Pathway. 
    6310   DNA Recombination  Any Process in Which a New Genotype Is Formed by Reassortment of Genes Resulting in Gene Combinations Different From Those That Were Present in the Parents. in Eukaryotes Genetic Recombination Can Occur by Chromosome Assortment Intrachromosomal Recombination or Nonreciprocal Interchromosomal Recombination. Intrachromosomal Recombination Occurs by Crossing Over. in Bacteria It May Occur by Genetic Transformation Conjugation Transduction or F Duction. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 
    3684   Damaged DNA Binding  Interacting Selectively and Non Covalently with Damaged Dna. 
    5524   ATP Binding  Interacting Selectively and Non Covalently with ATP Adenosine 5' Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    8094   DNA Dependent Atpase Activity  Catalysis of the Reaction: ATP + H2o = Adp + Phosphate; This Reaction Requires the Presence of Single or Double Stranded DNA and It Drives Another Reaction. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Scientific Name Pyrococcus furiosus  
    Host Scientific Name Escherichia coli  
    Host Variant Containing Pubs520 Plasmid
    Host Strain Bl21(de3)
    Host Vector Pbat4
    Host Vector Type Plasmid


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    - - 1469806     DNA repair and recombination protein RadA RADA