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Solution structure of CCP modules 11-12 of complement factor H
Biology and Chemistry Report
4B2S
  •   Structure Details   Hide

    Structure Keywords

    Keywords IMMUNE SYSTEM
    Text IMMUNE SYSTEM, SAXS, SHORT CONSENSUS REPEAT

    Polymeric Molecules

    Chain A
    Description COMPLEMENT FACTOR H 
    Fragment CCPS 11-12, RESIDUES 627-747 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 14111.9 
    Source Method genetically manipulated  
    Entity Name H FACTOR 1 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A CFAH_HUMAN A5PL14     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Komagataella pastoris  
    Host Strain Km71h
    Host Vector Type Plasmid
    Host Plasmid Name PPICZAB


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 1q32 3075     complement factor H CFH    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs199838420 LS-SNP   dbSNP   A 648 E - > G Coil 82% (Exposed) 1 196695669
    rs143237092 LS-SNP   dbSNP   A 650 G - > V Coil 15% (Intermediate) 1 196695675
    rs144467321 LS-SNP   dbSNP   A 676 G - > E Bend 55% (Exposed) 1 196695753
    rs148403790 LS-SNP   dbSNP   A 693 D - > N Bend 55% (Exposed) 1 196695911
    rs201961184 LS-SNP   dbSNP   A 697 L - > F Beta 11% (Intermediate) 1 196695923
    rs140984162 LS-SNP   dbSNP   A 718 N - > S Beta Ladder 41% (Exposed) 1 196695987
    rs142902005 LS-SNP   dbSNP   A 724 T - > K Beta Ladder 41% (Exposed) 1 196696005
    rs201360629 LS-SNP   dbSNP   A 732 T - > M Beta Ladder 33% (Intermediate) 1 196696029