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Crystal structure of phox homology domain of human sorting nexin 24
Biology and Chemistry Report
4AZ9
  •   Structure Details   Hide

    Structure Keywords

    Keywords PROTEIN TRANSPORT
    Text PROTEIN TRANSPORT

    Polymeric Molecules

    Chain A,B
    Description SORTING NEXIN-24 
    Fragment PHOX HOMOLOGY DOMAIN, RESIDUES 160-266 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 15510.0 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    EDO  1,2-ETHANEDIOL  C2 H6 O2   62.07  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B SNX24_HUMAN Q6UY33     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Escherichia coli  
    Host Variant R3 Prare2
    Host Strain Bl21(de3)
    Host Vector Type Plasmid
    Host Plasmid Name PNIC28-BSA4


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    5 5q23.2 28966     sorting nexin 24 SNX24    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs199717048 LS-SNP   dbSNP   A 8 F - > L Beta Ladder 37% (Exposed) 5 122181352
    rs199717048 LS-SNP   dbSNP   A 8 F - > L Beta Ladder 37% (Exposed) 5 122181352
    rs148714479 LS-SNP   dbSNP   A 44 A - > G Helix 53% (Exposed) 5 122272499
    rs148714479 LS-SNP   dbSNP   A 44 A - > G Helix 53% (Exposed) 5 122272499
    rs201364674 LS-SNP   dbSNP   A 48 K - > R Helix 41% (Exposed) 5 122272511
    rs201364674 LS-SNP   dbSNP   A 48 K - > R Helix 41% (Exposed) 5 122272511
    rs147890411 LS-SNP   dbSNP   A 98 D - > E Helix 42% (Exposed) 5 122335651
    rs147890411 LS-SNP   dbSNP   A 98 D - > E Helix 42% (Exposed) 5 122335651