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Structure of The GH47 processing alpha-1,2-mannosidase from Caulobacter strain K31 in complex with mannoimidazole
Biology and Chemistry Report
4AYQ
  •   Structure Details   Hide

    Structure Keywords

    Keywords HYDROLASE
    Text HYDROLASE, GLYCOSIDE HYDROLASE, GH47, CAZY, ENZYME-CARBOHYDRATE INTERACTION, MANNOSE, GLYCOSIDASE INHIBITION, QUANTUM MECHANICS

    Polymeric Molecules

    Chain A
    Description MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 50547.2 
    Source Method genetically manipulated  
    Entity Name ALPHA-1\,2-MANNOSIDASE 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    CA  CALCIUM ION  Ca   40.08  View 
    MVL  (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL  C8 H12 N2 O4   200.19  View 
    NA  SODIUM ION  Na   22.99  View 
    PEG  DI(HYDROXYETHYL)ETHER  C4 H10 O3   106.12  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A B0SWV2_CAUSK B0SWV2     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    3.2.1.113      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    8152   Metabolic Process  The Chemical Reactions and Pathways Including Anabolism and Catabolism by Which Living Organisms Transform Chemical Substances. Metabolic Processes Typically Transform Small Molecules But Also Include Macromolecular Processes Such As DNA Repair and Replication and Protein Synthesis and Degradation. 
    16020   Membrane  Double Layer of Lipid Molecules That Encloses All Cells and in Eukaryotes Many Organelles; May Be a Single or Double Lipid Bilayer; Also Includes Associated Proteins. 
    4571   Mannosyl Oligosaccharide 1 2 Alpha Mannosidase Activity  Catalysis of the Hydrolysis of the Terminal (1 >2) Linked Alpha D Mannose Residues in the Oligo Mannose Oligosaccharide Man(9)(glcnac)(2). 
    5509   Calcium Ion Binding  Interacting Selectively and Non Covalently with Calcium Ions (ca2+). 
    16787   Hydrolase Activity  Catalysis of the Hydrolysis of Various Bonds E.g. C O C N C C Phosphoric Anhydride Bonds Etc. Hydrolase Is the Systematic Name For Any Enzyme of EC Class 3. 
    16798   Hydrolase Activity Acting On Glycosyl Bonds  Catalysis of the Hydrolysis of Any Glycosyl Bond. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Scientific Name Caulobacter sp.  
    Strain K31
    Host Scientific Name Escherichia coli  
    Host Variant Tuner
    Host Strain Bl21(de3)
    Host Vector Pet21a
    Host Vector Type Plasmid