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Structure of a complex between CCPs 6 and 7 of Human Complement Factor H and Neisseria meningitidis FHbp Variant 3 P106A mutant
Biology and Chemistry Report
4AYM
  •   Structure Details   Hide

    Structure Keywords

    Keywords IMMUNE SYSTEM
    Text IMMUNE SYSTEM, ANTIGENS, VACCINES

    Polymeric Molecules

    Chain A,B,E,F
    Description COMPLEMENT FACTOR H 
    Fragment CCPS 6 AND 7, RESIDUES 321-443 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 14410.4 
    Source Method genetically manipulated  
    Entity Name H FACTOR 1 
    Chain C,D
    Description FACTOR H BINDING PROTEIN 
    Fragment RESIDUES 32-281 
    Mutation YES 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 29488.1 
    Source Method genetically manipulated  
    Entity Name LIPOPROTEIN GNA1870 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,E,F CFAH_HUMAN A5PL14     
    C,D Q19KF7_NEIME Q19KF7     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain C,D
    GO ID   Ontology GO Term Definition
    9279   Cell Outer Membrane  A Lipid Bilayer That Forms the Outermost Membrane of the Cell Envelope; Enriched in Polysaccharide and Protein; the Outer Leaflet of the Membrane Contains Specific Lipopolysaccharide Structures. 
    16021   Integral Component of Membrane  The Component of a Membrane Consisting of Gene Products and Protein Complexes That Have Some Part That Penetrates At Least One Leaflet of the Membrane Bilayer. This Component Includes Gene Products That Are Buried in the Bilayer with No Exposure Outside the Bilayer. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain C,D
    Scientific Name Neisseria meningitidis  
    Strain MC58
    Variant P28
    Host Scientific Name Escherichia coli  
    Host Variant B834(de3)
    Host Strain B
    Host Vector Type Plasmid
    Host Plasmid Name PET-14B


    Chain A,B,E,F
    Common Name Human
    Scientific Name Homo sapiens  
    Variant His402 Polymorphism
    Host Scientific Name Escherichia coli  
    Host Variant B834(de3)
    Host Strain B
    Host Vector Type Plasmid
    Host Plasmid Name PET-14B


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 1q32 3075     complement factor H CFH    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs200203654 LS-SNP   dbSNP   A 330 I - > T Coil 8% (Buried) 1 196658574
    rs145650378 LS-SNP   dbSNP   A 371 H - > N Beta Ladder 8% (Buried) 1 196658696
    rs201671665 LS-SNP   dbSNP   A 400 Q - > K Turn 91% (Exposed) 1 196659231
    rs199705026 LS-SNP   dbSNP   A 405 K - > N Beta Ladder 14% (Intermediate) 1 196659248
    rs121913056 LS-SNP   dbSNP   A 431 C - > S Beta Ladder 1% (Buried) 1 196659324
    rs200644601 LS-SNP   dbSNP   A 437 S - > Y Beta Ladder 45% (Exposed) 1 196659343