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Structure of a complex between CCPs 6 and 7 of Human Complement Factor H and Neisseria meningitidis FHbp Variant 1 R106A mutant
Biology and Chemistry Report
4AYD
  •   Structure Details   Hide

    Structure Keywords

    Keywords IMMUNE SYSTEM
    Text IMMUNE SYSTEM, ANTIGENS, VACCINES

    Polymeric Molecules

    Chain A,B,E
    Description COMPLEMENT FACTOR H 
    Fragment CCPS 6 AND 7, RESIDUES 321-443 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 14410.4 
    Source Method genetically manipulated  
    Entity Name H FACTOR 1 
    Chain C,D,F
    Description FACTOR H BINDING PROTEIN 
    Fragment RESIDUES 73-320 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 27614.0 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    EDO  1,2-ETHANEDIOL  C2 H6 O2   62.07  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,E CFAH_HUMAN A5PL14     
    C,D,F Q9JXV4_NEIMB Q9JXV4     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

     
  •   Gene Details   Hide

    Genetic Source

    Chain C,D,F
    Scientific Name Neisseria meningitidis  
    Strain MC58
    Host Scientific Name Escherichia coli  
    Host Strain B834(de3)
    Host Plasmid Name PET-21A


    Chain A,B,E
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Escherichia coli  
    Host Strain B834(de3)
    Host Vector Type Plasmid
    Host Plasmid Name PET-14B
    Description His402 Polymorphism


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 1q32 3075     complement factor H CFH    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs200203654 LS-SNP   dbSNP   A 330 I - > T Coil 10% (Intermediate) 1 196658574
    rs145650378 LS-SNP   dbSNP   A 371 H - > N Beta Ladder 8% (Buried) 1 196658696
    rs201671665 LS-SNP   dbSNP   A 400 Q - > K Turn 64% (Exposed) 1 196659231
    rs199705026 LS-SNP   dbSNP   A 405 K - > N Beta Ladder 5% (Buried) 1 196659248
    rs121913056 LS-SNP   dbSNP   A 431 C - > S Beta Ladder 0% (Buried) 1 196659324
    rs200644601 LS-SNP   dbSNP   A 437 S - > Y Beta Ladder 48% (Exposed) 1 196659343