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Structure of the Gh92 Family Glycosyl Hydrolase Ccman5 in complex with deoxymannojirimycin
Biology and Chemistry Report
4AQ0
  •   Structure Details   Hide

    Structure Keywords

    Keywords HYDROLASE
    Text HYDROLASE, MANNOSIDASE

    Polymeric Molecules

    Chain A,B
    Description CCMAN5 
    Fragment RESIDUES 1-774 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 84293.6 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    B3P  2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL  C11 H26 N2 O6   282.33  View 
    CA  CALCIUM ION  Ca   40.08  View 
    DMJ  1-DEOXYMANNOJIRIMYCIN  C6 H13 N O4   163.17  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B M1E1E9_CELCE M1E1E9     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B  3.2.1.24      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    5975   Carbohydrate Metabolic Process  The Chemical Reactions and Pathways Involving Carbohydrates Any of a Group of Organic Compounds Based of the General Formula Cx(h2o)y. Includes the Formation of Carbohydrate Derivatives by the Addition of a Carbohydrate Residue to Another Molecule. 
    3824   Catalytic Activity  Catalysis of a Biochemical Reaction At Physiological Temperatures. in Biologically Catalyzed Reactions the Reactants Are Known As Substrates and the Catalysts Are Naturally Occurring Macromolecular Substances Known As Enzymes. Enzymes Possess Specific Binding Sites For Substrates and Are Usually Composed Wholly or Largely of Protein But RNA That Has Catalytic Activity (ribozyme) Is Often Also Regarded As Enzymatic. 
    4559   Alpha Mannosidase Activity  Catalysis of the Hydrolysis of Terminal Non Reducing Alpha D Mannose Residues in Alpha D Mannosides. 
    30246   Carbohydrate Binding  Interacting Selectively and Non Covalently with Any Carbohydrate Which Includes Monosaccharides Oligosaccharides and Polysaccharides As Well As Substances Derived From Monosaccharides by Reduction of the Carbonyl Group (alditols) by Oxidation of One or More Hydroxy Groups to Afford the Corresponding Aldehydes Ketones or Carboxylic Acids or by Replacement of One or More Hydroxy Group(s) by a Hydrogen Atom. Cyclitols Are Generally Not Regarded As Carbohydrates. 
    46872   Metal Ion Binding  Interacting Selectively and Non Covalently with Any Metal Ion. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Scientific Name Cellulosimicrobium cellulans  
    ATCC Source 27402
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)