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Turnip yellow mosaic virus proteinase and Escherichia coli 30S ribosomal S15
Biology and Chemistry Report
4A5U
  •   Structure Details   Hide

    Structure Keywords

    Keywords TRANSFERASE/RNA BINDING PROTEIN
    Text TRANSFERASE-RNA BINDING PROTEIN COMPLEX, CYSTEINE PROTEINASE

    Polymeric Molecules

    Chain A
    Description RNA REPLICASE POLYPROTEIN 
    Fragment POLYPROTEIN PROCESSING PROTEINASE DOMAIN, RESIDUES 728-879 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 17779.0 
    Source Method genetically manipulated  
    Chain B
    Description 30S RIBOSOMAL PROTEIN S15 
    Fragment RESIDUES 2-89 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 10159.7 
    Source Method natural source  

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A POLR_TYMV P10358     
    B E8Y371_ECOKO E8Y371     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    2.1.1      
    3.4.22      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    16032   Viral Process  A Multi Organism Process in Which a Virus Is a Participant. the Other Participant Is the Host. Includes Infection of a Host Cell Replication of the Viral Genome and Assembly of Progeny Virus Particles. in Some Cases the Viral Genetic Material May Integrate Into the Host Genome and Only Subsequently Under Particular Circumstances 'complete' Its Life Cycle. 
    3968   RNA Directed RNA Polymerase Activity  Catalysis of the Reaction: Nucleoside Triphosphate + Rna(n) = Diphosphate + Rna(n+1); Uses an RNA Template. 
    Chain B
    GO ID   Ontology GO Term Definition
    6412   Translation  The Cellular Metabolic Process in Which a Protein Is Formed Using the Sequence of a Mature MRNA Molecule to Specify the Sequence of Amino Acids in a Polypeptide Chain. Translation Is Mediated by the Ribosome and Begins with the Formation of a Ternary Complex Between Aminoacylated Initiator Methionine TRNA GTP and Initiation Factor 2 Which Subsequently Associates with the Small Subunit of the Ribosome and an Mrna. Translation Ends with the Release of a Polypeptide Chain From the Ribosome. 
    5622   Intracellular  The Living Contents of a Cell; the Matter Contained Within (but Not Including) the Plasma Membrane Usually Taken to Exclude Large Vacuoles and Masses of Secretory or Ingested Material. in Eukaryotes It Includes the Nucleus and Cytoplasm. 
    5840   Ribosome  An Intracellular Organelle About 200 a in Diameter Consisting of RNA and Protein. It Is the Site of Protein Biosynthesis Resulting From Translation of Messenger RNA (mrna). It Consists of Two Subunits One Large and One Small Each Containing Only Protein and Rna. Both the Ribosome and Its Subunits Are Characterized by Their Sedimentation Coefficients Expressed in Svedberg Units (symbol: S). Hence the Prokaryotic Ribosome (70s) Comprises a Large (50s) Subunit and a Small (30s) Subunit While the Eukaryotic Ribosome (80s) Comprises a Large (60s) Subunit and a Small (40s) Subunit. Two Sites On the Ribosomal Large Subunit Are Involved in Translation Namely the Aminoacyl Site (a Site) and Peptidyl Site (p Site). Ribosomes From Prokaryotes Eukaryotes Mitochondria and Chloroplasts Have Characteristically Distinct Ribosomal Proteins. 
    30529   Ribonucleoprotein Complex  A Macromolecular Complex Containing Both Protein and RNA Molecules. 
    3723   RNA Binding  Interacting Selectively and Non Covalently with an RNA Molecule or a Portion Thereof. 
    3735   Structural Constituent of Ribosome  The Action of a Molecule That Contributes to the Structural Integrity of the Ribosome. 
    19843   RRNA Binding  Interacting Selectively and Non Covalently with Ribosomal Rna. 


     
  •   Gene Details   Hide

    Natural Source

    Chain B
    Scientific Name Escherichia coli  
    Strain BL21(DE3)

    Genetic Source

    Chain A
    Scientific Name Turnip yellow mosaic virus  
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Vector Pgex Modified
    Host Vector Type Plasmid