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Human myelin P2 protein, K45S mutant
Biology and Chemistry Report
4A1H
  •   Structure Details   Hide

    Structure Keywords

    Keywords TRANSPORT
    Text TRANSPORT, LIPID-BINDING

    Polymeric Molecules

    Chain A,B,C
    Description MYELIN P2 PROTEIN 
    Mutation YES 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 14949.5 
    Source Method genetically manipulated  
    Entity Name PERIPHERAL MYELIN PROTEIN 2 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    CL  CHLORIDE ION  Cl   35.45  View 
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    PLM  PALMITIC ACID  C16 H32 O2   256.42  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C MYP2_HUMAN P02689     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C
    GO ID   Ontology GO Term Definition
    6810   Transport  The Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells or Within a Multicellular Organism by Means of Some Agent Such As a Transporter or Pore. 
    61024   Membrane Organization  A Process Which Results in the Assembly Arrangement of Constituent Parts or Disassembly of a Membrane. a Membrane Is a Double Layer of Lipid Molecules That Encloses All Cells and in Eukaryotes Many Organelles; May Be a Single or Double Lipid Bilayer; Also Includes Associated Proteins. 
    5737   Cytoplasm  All of the Contents of a Cell Excluding the Plasma Membrane and Nucleus But Including Other Subcellular Structures. 
    70062   Extracellular Vesicular Exosome  A Membrane Bounded Vesicle That Is Released Into the Extracellular Region by Fusion of the Limiting Endosomal Membrane of a Multivesicular Body with the Plasma Membrane. 
    5215   Transporter Activity  Enables the Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells. 
    5504   Fatty Acid Binding  Interacting Selectively and Non Covalently with Fatty Acids Aliphatic Monocarboxylic Acids Liberated From Naturally Occurring Fats and Oils by Hydrolysis. 
    8289   Lipid Binding  Interacting Selectively and Non Covalently with a Lipid. 
    15485   Cholesterol Binding  Interacting Selectively and Non Covalently with Cholesterol (cholest 5 En 3 Beta Ol); the Principal Sterol of Vertebrates and the Precursor of Many Steroids Including Bile Acids and Steroid Hormones. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Escherichia coli  
    Host Variant Rosetta
    Host Strain Bl21(de3)
    Host Vector Type Plasmid
    Host Plasmid Name PTH27


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    8 8q21.3-q22.1 5375     peripheral myelin protein 2 PMP2    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs147400206 LS-SNP   dbSNP   A 6 G - > S Beta Ladder 25% (Intermediate) 8 82359603
    rs113226355 LS-SNP   dbSNP   A 49 I - > T Beta Ladder 2% (Buried) 8 82357149
    rs76057946 LS-SNP   dbSNP   A 59 N - > IT Beta Ladder 54% (Exposed) 8 82357119 PLM
    rs201897444 LS-SNP   dbSNP   A 69 E - > G Coil 53% (Exposed) 8 82357089
    rs149339630 LS-SNP   dbSNP   A 83 I - > M Beta Ladder 20% (Intermediate) 8 82356831
    rs201080587 LS-SNP   dbSNP   A 84 V - > I Beta Ladder 2% (Buried) 8 82356830
    rs202025915 LS-SNP   dbSNP   A 117 C - > Y Beta Ladder 6% (Buried) 8 82355679 PLM
    rs79716681 LS-SNP   dbSNP   A 121 G - > D Turn 69% (Exposed) 8 82355667