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Crystal Structure of Ankyrin Repeat and Socs Box-Containing Protein 9 (Asb9) in Complex with Elonginb and Elonginc
Biology and Chemistry Report
3ZKJ
  •   Structure Details   Hide

    Structure Keywords

    Keywords TRANSCRIPTION
    Text TRANSCRIPTION, TRANSCRIPTION REGULATION, AUTOANTIBODY

    Polymeric Molecules

    Chain A,D
    Description ANKYRIN REPEAT AND SOCS BOX PROTEIN 9 
    Fragment RESIDUES 35-294 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 28560.0 
    Source Method genetically manipulated  
    Entity Name ASB-9 
    Chain B,E
    Description TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 
    Fragment RESIDUES 17-112 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 10843.5 
    Source Method genetically manipulated  
    Entity Name RNA POLYMERASE II TRANSCRIPTION FACTOR, ELOC, SIII SUBUNIT C, SIII P15, ELONGIN 15 KDA SUBUNIT, ELONGIN-C 
    Chain C,F
    Description TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 
    Fragment RESIDUES 221-338 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 13147.9 
    Source Method genetically manipulated  
    Entity Name RNA POLYMERASE II TRANSCRIPTION FACTOR SIII SUBUNIT B, SIII P18, ELONGIN-B, ELOB, ELONGIN 18 KDA SUBUNIT 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    CL  CHLORIDE ION  Cl   35.45  View 
    EDO  1,2-ETHANEDIOL  C2 H6 O2   62.07  View 
    PEG  DI(HYDROXYETHYL)ETHER  C4 H10 O3   106.12  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,D ASB9_HUMAN A8K8A5     
    B,E ELOC_HUMAN E5RGD9     
    C,F ELOB_HUMAN B7WPD3     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain C,F
    GO ID   Ontology GO Term Definition
    6351   Transcription DNA Templated  The Cellular Synthesis of RNA On a Template of Dna. 
    6355   Regulation of Transcription DNA Templated  Any Process That Modulates the Frequency Rate or Extent of Cellular DNA Templated Transcription. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    5515   Protein Binding  Interacting Selectively and Non Covalently with Any Protein or Protein Complex (a Complex of Two or More Proteins That May Include Other Nonprotein Molecules). 


     
  •   Gene Details   Hide

    Genetic Source

    Chain C,F
    Common Name Human
    Scientific Name Homo sapiens  
    Organ Kidney
    Host Scientific Name Escherichia coli  
    Host Strain Bl21
    Host Vector Type Plasmid
    Host Plasmid Name P11


    Chain B,E
    Common Name Human
    Scientific Name Homo sapiens  
    Organ Kidney
    Host Scientific Name Escherichia coli  
    Host Strain Bl21
    Host Vector Type Plasmid
    Host Plasmid Name P11


    Chain A,D
    Common Name Human
    Scientific Name Homo sapiens  
    Organ Kidney
    Host Scientific Name Escherichia coli  
    Host Strain Bl21
    Host Vector Type Plasmid
    Host Plasmid Name P11


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    8 8q21.11 6921     transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) TCEB1    
    16 16p12.3 6923     transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B) TCEB2    
    X Xp22.2 140462     ankyrin repeat and SOCS box containing 9 ASB9