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Human MST3 (STK24) in complex with MO25beta
Biology and Chemistry Report
3ZHP
  •   Structure Details   Hide

    Structure Keywords

    Keywords CELL CYCLE
    Text CELL CYCLE, MO25,

    Polymeric Molecules

    Chain A,B
    Description CALCIUM-BINDING PROTEIN 39-LIKE 
    Fragment RESIDUES 5-337 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 39280.0 
    Source Method genetically manipulated  
    Entity Name ANTIGEN MLAA-34, MO25BETA, MO25-LIKE PROTEIN 
    Chain C,D
    Description SERINE/THREONINE-PROTEIN KINASE 24 
    Fragment KINASE DOMAIN, RESIDUES 19-289 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 33303.3 
    Source Method genetically manipulated  
    Entity Name MAMMALIAN STE20-LIKE PROTEIN KINASE 3, MST-3, STE20-LIKE KINASE MST3, SERINE/THREONINE-PROTEIN KINASE 24 36 KDA SUBUNIT, MAMMALIAN STE20-LIKE PROTEIN KINASE 3 N-TERMINAL, MST3/N, SERINE/THREONINE-PROTEIN KINASE 24 12 KDA SUBUNIT, MAMMALIAN STE20-LIKE PROTEIN KINASE 3 C-TERMINAL, MST3/C 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    SO4  SULFATE ION  O4 S   96.06  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B CB39L_HUMAN Q9H9S4     
    C,D STK24_HUMAN Q9Y6E0     

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    C D  2.7.11.1      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    7050   Cell Cycle Arrest  A Regulatory Process That Halts Progression Through the Cell Cycle During One of the Normal Phases (g1 S G2 M). 
    8286   Insulin Receptor Signaling Pathway  The Series of Molecular Signals Generated As a Consequence of the Insulin Receptor Binding to Insulin. 
    5829   Cytosol  The Part of the Cytoplasm That Does Not Contain Organelles But Which Does Contain Other Particulate Matter Such As Protein Complexes. 
    70062   Extracellular Exosome  A Membrane Bounded Vesicle That Is Released Into the Extracellular Region by Fusion of the Limiting Endosomal Membrane of a Multivesicular Body with the Plasma Membrane. Extracellular Exosomes Also Simply Called Exosomes Have a Diameter of About 40 100 Nm. 
    5515   Protein Binding  Interacting Selectively and Non Covalently with Any Protein or Protein Complex (a Complex of Two or More Proteins That May Include Other Nonprotein Molecules). 
    Chain C,D
    GO ID   Ontology GO Term Definition
    6468   Protein Phosphorylation  The Process of Introducing a Phosphate Group On to a Protein. 
    9966   Regulation of Signal Transduction  Any Process That Modulates the Frequency Rate or Extent of Signal Transduction. 
    4672   Protein Kinase Activity  Catalysis of the Phosphorylation of an Amino Acid Residue in a Protein Usually According to the Reaction: a Protein + ATP = a Phosphoprotein + Adp. 
    4674   Protein Serine/threonine Kinase Activity  Catalysis of the Reactions: ATP + Protein Serine = Adp + Protein Serine Phosphate and ATP + Protein Threonine = Adp + Protein Threonine Phosphate. 
    5524   ATP Binding  Interacting Selectively and Non Covalently with ATP Adenosine 5' Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    16772   Transferase Activity Transferring Phosphorus Containing Groups  Catalysis of the Transfer of a Phosphorus Containing Group From One Compound (donor) to Another (acceptor). 


     
  •   Gene Details   Hide

    Genetic Source

    Chain C,D
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Plasmid Name PNIC28-BSA4


    Chain A,B
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Plasmid Name PGEX-6P-1


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    13 13q14.2 81617     calcium binding protein 39-like CAB39L    
    13 13q31.2-q32.3 8428     serine/threonine kinase 24 STK24    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs11546263 LS-SNP   dbSNP   A 93 G - > E Helix 0% (Buried) 13 49933967
    rs138590524 LS-SNP   dbSNP   A 113 S - > I Coil 12% (Intermediate) 13 49933907
    rs149022536 LS-SNP   dbSNP   A 141 R - > H Helix 22% (Intermediate) 13 49925022
    rs117097137 LS-SNP   dbSNP   A 158 I - > V Helix 27% (Intermediate) 13 49924972
    rs75421260 LS-SNP   dbSNP   A 238 D - > N Bend 23% (Intermediate) 13 49906205
    rs199498743 LS-SNP   dbSNP   A 239 R - > C 3/10 Helix 52% (Exposed) 13 49906202
    rs149844947 LS-SNP   dbSNP   A 239 R - > H 3/10 Helix 52% (Exposed) 13 49906201
    rs186705879 LS-SNP   dbSNP   A 247 K - > E Helix 23% (Intermediate) 13 49906178
    rs141087677 LS-SNP   dbSNP   A 302 I - > T Helix 21% (Intermediate) 13 49885059
    rs147754748 LS-SNP   dbSNP   A 309 Q - > H Turn 15% (Intermediate) 13 49885037
    rs145546637 LS-SNP   dbSNP   A 313 T - > K Coil 83% (Exposed) 13 49885026
    rs140130891 LS-SNP   dbSNP   A 315 D - > Y Coil 29% (Intermediate) 13 49885021
    rs201752817 LS-SNP   dbSNP   A 319 A - > T Helix 34% (Intermediate) 13 49885009
    rs144245337 LS-SNP   dbSNP   A 324 Y - > C Helix 53% (Exposed) 13 49884993
    rs138709503 LS-SNP   dbSNP   C 18 A - > T Coil 44% (Exposed) 13 99171718
    rs147174875 LS-SNP   dbSNP   C 23 L - > V Turn 37% (Exposed) 13 99171703
    rs147189846 LS-SNP   dbSNP   C 45 R - > Q Turn 46% (Exposed) 13 99171636
    rs113816588 LS-SNP   dbSNP   C 75 S - > G Helix 36% (Exposed) 13 99171547
    rs200051143 LS-SNP   dbSNP   C 120 Q - > R Helix 15% (Intermediate) 13 99127584
    rs200214942 LS-SNP   dbSNP   C 198 S - > L Turn 25% (Intermediate) 13 99127079
    rs3198689 LS-SNP   dbSNP   C 224 P - > S Helix 39% (Exposed) 13 99118743
    rs183029623 LS-SNP   dbSNP   C 238 T - > M Coil 50% (Exposed) 13 99118700