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An Information Portal to 110790 Biological Macromolecular Structures

Snapshot 3 of RIG-I scanning on RNA duplex
Biology and Chemistry Report
3ZD7
  •   Structure Details   Hide

    Structure Keywords

    Keywords HYDROLASE/RNA
    Text HYDROLASE-RNA COMPLEX, HELICASE, INNATE IMMUNITY

    Polymeric Molecules

    Chain A
    Description PROBABLE ATP-DEPENDENT RNA HELICASE DDX58 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 79712.5 
    Source Method natural source  
    Entity Name DEAD BOX PROTEIN 58, RIG-I-LIKE RECEPTOR 1, RLR-1, RETINOIC ACID-INDUCIBLE GENE 1 PROTEIN, RIG-1, RETINOIC ACID-INDUCIBLE GENE I PROTEIN, RIG-I 
    Chain C,D
    Description RNA DUPLEX 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polyribonucleotide 
    Formula Weight 3207.0 
    Source Method synthetic  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    ADP  ADENOSINE-5'-DIPHOSPHATE  C10 H15 N5 O10 P2   427.20  View 
    MG  MAGNESIUM ION  Mg   24.31  View 
    ZN  ZINC ION  Zn   65.41  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A DDX58_HUMAN O95786     

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    3.6.4.13      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 
    5524   ATP Binding  Interacting Selectively and Non Covalently with ATP Adenosine 5' Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 
    16787   Hydrolase Activity  Catalysis of the Hydrolysis of Various Bonds E.g. C O C N C C Phosphoric Anhydride Bonds Etc. Hydrolase Is the Systematic Name For Any Enzyme of EC Class 3. 
    16817   Hydrolase Activity Acting On Acid Anhydrides  Catalysis of the Hydrolysis of Any Acid Anhydride. 


     
  •   Gene Details   Hide

    Natural Source

    Chain A
    Common Name Human
    Scientific Name Homo sapiens  

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    9 9p12 23586     DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 DDX58