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Insulin receptor ectodomain construct comprising domains L1,CR,L2, FNIII-1 and alphact peptide in complex with bovine insulin and FAB 83-14
Biology and Chemistry Report
3W14
  •   Structure Details   Hide

    Structure Keywords

    Keywords HORMONE/HORMONE RECEPTOR/IMMUNE SYSTEM
    Text CELL SURFACE RECEPTOR/IMMUNE SYSTEM, INSULIN RECEPTOR, IR ECTODOMAIN, CT PEPTIDE, INSULIN, HORMONE-HORMONE RECEPTOR-IMMUNE SYSTEM complex

    Polymeric Molecules

    Chain A,I
    Description Insulin A chain 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 2339.7 
    Source Method natural source  
    Chain B,J
    Description Insulin B chain 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 3404.0 
    Source Method natural source  
    Chain C,P
    Description MONOCLONAL ANTIBODY FAB 83-14 - HEAVY CHAIN 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 22127.9 
    Source Method genetically manipulated  
    Chain D,Q
    Description MONOCLONAL ANTIBODY FAB 83-14 - LIGHT CHAIN 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 23525.1 
    Source Method genetically manipulated  
    Chain E,F
    Description INSULIN RECEPTOR DOMAINS L1-CR-L2-(FNIII-1)-ALPHACT 
    Fragment UNP residues 28-620, 731-746 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 69980.4 
    Source Method genetically manipulated  
    Entity Name IR, INSULIN RECEPTOR L1-CR-L2-(FNIII-1)-ACT, IR593.ALPHACT 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,I INS_BOVIN P01317     
    B,J INS_BOVIN P01317     
    E,F INSR_HUMAN P06213     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    E F  2.7.10.1      

    Immune Epitopes (B-cell and T-Cell)

    Immune Epitope Database (IEDB)
    Epitope ID 190192    
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,I
    GO ID   Ontology GO Term Definition
    5576   Extracellular Region  The Space External to the Outermost Structure of a Cell. For Cells Without External Protective or External Encapsulating Structures This Refers to Space Outside of the Plasma Membrane. This Term Covers the Host Cell Environment Outside an Intracellular Parasite. 
    5179   Hormone Activity  The Action Characteristic of a Hormone Any Substance Formed in Very Small Amounts in One Specialized Organ or Group of Cells and Carried (sometimes in the Bloodstream) to Another Organ or Group of Cells in the Same Organism Upon Which It Has a Specific Regulatory Action. the Term Was Originally Applied to Agents with a Stimulatory Physiological Action in Vertebrate Animals (as Opposed to a Chalone Which Has a Depressant Action). Usage Is Now Extended to Regulatory Compounds in Lower Animals and Plants and to Synthetic Substances Having Comparable Effects; All Bind Receptors and Trigger Some Biological Process. 
    Chain B,J
    GO ID   Ontology GO Term Definition
    5576   Extracellular Region  The Space External to the Outermost Structure of a Cell. For Cells Without External Protective or External Encapsulating Structures This Refers to Space Outside of the Plasma Membrane. This Term Covers the Host Cell Environment Outside an Intracellular Parasite. 
    5179   Hormone Activity  The Action Characteristic of a Hormone Any Substance Formed in Very Small Amounts in One Specialized Organ or Group of Cells and Carried (sometimes in the Bloodstream) to Another Organ or Group of Cells in the Same Organism Upon Which It Has a Specific Regulatory Action. the Term Was Originally Applied to Agents with a Stimulatory Physiological Action in Vertebrate Animals (as Opposed to a Chalone Which Has a Depressant Action). Usage Is Now Extended to Regulatory Compounds in Lower Animals and Plants and to Synthetic Substances Having Comparable Effects; All Bind Receptors and Trigger Some Biological Process. 
    Chain E,F
    GO ID   Ontology GO Term Definition
    6468   Protein Phosphorylation  The Process of Introducing a Phosphate Group On to a Protein. 
    7169   Transmembrane Receptor Protein Tyrosine Kinase Signaling Pathway  A Series of Molecular Signals Initiated by the Binding of an Extracellular Ligand to a Receptor On the Surface of the Target Cell Where the Receptor Possesses Tyrosine Kinase Activity and Ending with Regulation of a Downstream Cellular Process E.g. Transcription. 
    16020   Membrane  Double Layer of Lipid Molecules That Encloses All Cells and in Eukaryotes Many Organelles; May Be a Single or Double Lipid Bilayer; Also Includes Associated Proteins. 
    4714   Transmembrane Receptor Protein Tyrosine Kinase Activity  Combining with a Signal and Transmitting the Signal From One Side of the Membrane to the Other to Initiate a Change in Cell Activity by Catalysis of the Reaction: ATP + a Protein L Tyrosine = Adp + a Protein L Tyrosine Phosphate. 
    5524   ATP Binding  Interacting Selectively and Non Covalently with ATP Adenosine 5' Triphosphate a Universally Important Coenzyme and Enzyme Regulator. 


     
  •   Gene Details   Hide

    Natural Source

    Chain B,J
    Common Name Bovine
    Scientific Name Bos taurus  
    Genus Ins
    Chain A,I
    Common Name Bovine
    Scientific Name Bos taurus  
    Genus Ins

    Genetic Source

    Chain E,F
    Common Name Human
    Scientific Name Homo sapiens  
    Gene insr
    Host Common Name Chinese Hamster
    Host Scientific Name Cricetulus griseus  
    Host Cell Type Cho Cell
    Host Cell Line Lec8 Mutant


    Chain D,Q
    Common Name Mouse
    Scientific Name Mus musculus  
    Host Common Name Mouse
    Host Scientific Name Mus musculus  
    Host Cell Type Hybridoma Cell


    Chain C,P
    Common Name Mouse
    Scientific Name Mus musculus  
    Host Common Name Mouse
    Host Scientific Name Mus musculus  
    Host Cell Type Hybridoma Cell


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    19 19p13.3-p13.2 3643     insulin receptor INSR    
    29 - 280829     insulin INS    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs121913143 LS-SNP   dbSNP   E 15 N - > K Bend 29% (Intermediate) 19 7267882
    rs144718517 LS-SNP   dbSNP   E 16 N - > S Coil 59% (Exposed) 19 7267880
    rs140852238 LS-SNP   dbSNP   E 24 E - > K Turn 56% (Exposed) 19 7267857
    rs121913152 LS-SNP   dbSNP   E 28 V - > A Beta Ladder 0% (Buried) 19 7267844
    rs52836744 LS-SNP   dbSNP   E 31 G - > *R Beta Ladder 11% (Intermediate) 19 7267836
    rs78827745 LS-SNP   dbSNP   E 38 M - > K Beta Ladder 0% (Buried) 19 7267814
    rs142910337 LS-SNP   dbSNP   E 48 D - > G Turn 73% (Exposed) 19 7267784
    rs148554947 LS-SNP   dbSNP   E 55 I - > T Coil 14% (Intermediate) 19 7267763
    rs140762552 LS-SNP   dbSNP   E 80 T - > M Coil 1% (Buried) 19 7267688
    rs121913153 LS-SNP   dbSNP   E 86 R - > P Bend 62% (Exposed) 19 7267670
    rs121913159 LS-SNP   dbSNP   E 119 I - > M Beta Ladder 0% (Buried) 19 7267570
    rs140955974 LS-SNP   dbSNP   E 134 S - > F 3/10 Helix 34% (Intermediate) 19 7267526
    rs1051692 LS-SNP   dbSNP   E 144 Y - > H Beta Ladder 13% (Intermediate) 19 7267497
    rs147233169 LS-SNP   dbSNP   E 145 I - > N Beta Ladder 30% (Intermediate) 19 7267493
    rs143919163 LS-SNP   dbSNP   E 165 G - > D Bend 70% (Exposed) 19 7267433
    rs199659271 LS-SNP   dbSNP   E 192 C - > R Coil 21% (Intermediate) 19 7184646
    rs121913145 LS-SNP   dbSNP   E 209 H - > R Coil 24% (Intermediate) 19 7184594
    rs121913141 LS-SNP   dbSNP   E 233 L - > P Beta Ladder 15% (Intermediate) 19 7184522
    rs891087 LS-SNP   dbSNP   E 234 D - > E Turn 79% (Exposed) 19 7184518
    rs141484557 LS-SNP   dbSNP   E 235 G - > S Turn 48% (Exposed) 19 7184517
    rs200199169 LS-SNP   dbSNP   E 244 P - > L Turn 63% (Exposed) 19 7184489
    rs144645940 LS-SNP   dbSNP   E 265 K - > Q Turn 67% (Exposed) 19 7184427
    rs201147780 LS-SNP   dbSNP   E 267 K - > R Coil 85% (Exposed) 19 7184420
    rs138528064 LS-SNP   dbSNP   E 293 T - > M Beta Ladder 30% (Intermediate) 19 7184342
    rs55816055 LS-SNP   dbSNP   E 326 S - > P Helix 5% (Buried) 19 7174660
    rs72549237 LS-SNP   dbSNP   E 335 V - > I Beta Ladder 20% (Intermediate) 19 7174633
    rs144929085 LS-SNP   dbSNP   E 375 A - > P Turn 32% (Intermediate) 19 7172365
    rs121913142 LS-SNP   dbSNP   E 382 F - > V Coil 1% (Buried) 19 7172344
    rs181150880 LS-SNP   dbSNP   E 383 R - > Q Turn 47% (Exposed) 19 7172340
    rs200059069 LS-SNP   dbSNP   E 384 K - > Q Turn 51% (Exposed) 19 7172338
    rs79312957 LS-SNP   dbSNP   E 386 R - > C Coil 38% (Exposed) 19 7172332
    rs121913158 LS-SNP   dbSNP   E 412 W - > S Bend 2% (Buried) 19 7170715
    rs1051691 LS-SNP   dbSNP   E 421 I - > T Beta Ladder 1% (Buried) 19 7170688
    rs121913160 LS-SNP   dbSNP   E 431 N - > D Beta 0% (Buried) 19 7170659
    rs121913136 LS-SNP   dbSNP   E 460 K - > E Bend 88% (Exposed) 19 7170572
    rs121913147 LS-SNP   dbSNP   E 462 N - > S Beta 3% (Buried) 19 7170565
    rs1131851 LS-SNP   dbSNP   E 465 Q - > K Turn 56% (Exposed) 19 7170557
    rs147671523 LS-SNP   dbSNP   E 490 E - > G Coil 12% (Intermediate) 19 7168039
    rs201978448 LS-SNP   dbSNP   E 510 A - > V Coil 59% (Exposed) 19 7167979
    rs141626777 LS-SNP   dbSNP   E 552 L - > V Beta Ladder 3% (Buried) 19 7166291