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Crystal structure of Oryza sativa DWARF14 (D14) in complex with PMSF
Biology and Chemistry Report
3W05
  •   Structure Details   Hide

    Structure Keywords

    Keywords SIGNALING PROTEIN
    Text STRIGOLACTONE SIGNALING, ALPHA/BETA HYDROLASE, STRIGOLACTONE Hydrolysis, SIGNALING PROTEIN

    Polymeric Molecules

    Chain A,B
    Description Dwarf 88 esterase 
    Fragment UNP residues 55-318 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 29191.7 
    Source Method genetically manipulated  
    Entity Name Hydrolase, alpha/beta fold family protein, expressed, Os03g0203200 protein 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    EDO  1,2-ETHANEDIOL  C2 H6 O2   62.07  View 
    PMS  phenylmethanesulfonic acid  C7 H8 O3 S   172.20  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B D14_ORYSJ Q10QA5     

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B  3.1      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    10223   Secondary Shoot Formation  The Process That Gives Rise to Secondary (or Auxiliary or Axillary) Shoots in Plants. This Process Pertains to the Initial Formation of a Structure From Unspecified Parts. These Secondary Shoots Originate From Secondary Meristems Initiated in the Axils of Leaf Primordia. Axillary Meristems Function Like the Shoot Apical Meristem of the Primary Shoot Initating the Development of Lateral Organs. 
    1901601   Strigolactone Biosynthetic Process  The Chemical Reactions and Pathways Resulting in the Formation of Strigolactone. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Japanese Rice
    Scientific Name Oryza sativa japonica group  
    Gene d88, loc_os03g10620, os03g0203200
    Host Scientific Name Escherichia coli  
    Host Strain Bl21 Star (de3)
    Host Vector Type Plasmid
    Host Plasmid Name PET47B