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Crystal structure of A20 ZF7 in complex with linear tetraubiquitin
Biology and Chemistry Report
3VUY
  •   Structure Details   Hide

    Structure Keywords

    Keywords PROTEIN BINDING/METAL BINDING PROTEIN
    Text zinc finger, PROTEIN BINDING-METAL BINDING PROTEIN complex

    Polymeric Molecules

    Chain A,B,C
    Description Polyubiquitin-C 
    Fragment Ubiquitin 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 8576.9 
    Source Method genetically manipulated  
    Chain D,E,F
    Description Tumor necrosis factor alpha-induced protein 3 
    Fragment A20-type 7 Zinc finger domain, residues 757-790 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 3976.6 
    Source Method genetically manipulated  
    Entity Name TNF alpha-induced protein 3, OTU domain-containing protein 7C, Putative DNA-binding protein A20, Zinc finger protein A20 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    POTASSIUM ION  K   39.10  View 
    ZN  ZINC ION  Zn   65.41  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C UBC_HUMAN P0CG48     
    D,E,F TNAP3_HUMAN P21580     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    D E F  3.4.19.12      
    D E F  6.3.2      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain D,E,F
    GO ID   Ontology GO Term Definition
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 
    8270   Zinc Ion Binding  Interacting Selectively and Non Covalently with Zinc (zn) Ions. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain D,E,F
    Common Name Human
    Scientific Name Homo sapiens  
    Gene tnfaip3
    Host Scientific Name Escherichia coli  
    Host Strain Rosetta2(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pGEX-6P-1


    Chain A,B,C
    Common Name Human
    Scientific Name Homo sapiens  
    Gene ubc
    Host Scientific Name Escherichia coli  
    Host Strain Rosetta2(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pT7


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    6 6q23 7128     tumor necrosis factor, alpha-induced protein 3 TNFAIP3    
    12 12q24.3 7316     ubiquitin C UBC