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The structure of monodechloro-teicoplanin in complex with its ligand, using MBP as a ligand carrier
Biology and Chemistry Report
3VFJ
  •   Structure Details   Hide

    Structure Keywords

    Keywords SUGAR BINDING PROTEIN/ANTIBIOTIC
    Text teicoplanin, acetylation of cyteine with iodoacetate modification, SUGAR BINDING PROTEIN-ANTIBIOTIC complex

    Polymeric Molecules

    Chain A
    Description Maltose-binding periplasmic protein, C-terminal fused by Cys-Lys-D-Ala-D-Ala 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(D) 
    Formula Weight 41343.2 
    Source Method genetically manipulated  
    Entity Name MBP, MMBP, Maltodextrin-binding protein 
    Chain G
    Description MonodeChloro- Teicoplanin A2-2 
    Nonstandard Linkage no 
    Nonstandard Monomers yes 
    Polymer Type polypeptide(L) 
    Formula Weight 1172.6 
    Source Method natural source  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    ACT  ACETATE ION  C2 H3 O2   59.04  View 
    CAC  CACODYLATE ION  C2 H6 As O2   136.99  View 
    GCS  D-GLUCOSAMINE  C6 H13 N O5   179.17  View 
    MAN  ALPHA-D-MANNOSE  C6 H12 O6   180.16  View 
    NAG  N-ACETYL-D-GLUCOSAMINE  C8 H15 N O6   221.21  View 
    T55  8-METHYLNONANOIC ACID  C10 H20 O2   172.27  View 
    ZN  ZINC ION  Zn   65.41  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A MALE_ECOLI P02928     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    6810   Transport  The Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells or Within a Multicellular Organism by Means of Some Agent Such As a Transporter or Pore. 
    8643   Carbohydrate Transport  The Directed Movement of Carbohydrate Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. Carbohydrates Are Any of a Group of Organic Compounds Based of the General Formula Cx(h2o)y. 
    42597   Periplasmic Space  The Region Between the Inner (cytoplasmic) and Outer Membrane (gram Negative Bacteria) or Cytoplasmic Membrane and Cell Wall (fungi and Gram Positive Bacteria). 
    5515   Protein Binding  Interacting Selectively and Non Covalently with Any Protein or Protein Complex (a Complex of Two or More Proteins That May Include Other Nonprotein Molecules). 


     
  •   Gene Details   Hide

    Natural Source

    Chain G
    Scientific Name Actinoplanes teichomyceticus  

    Genetic Source

    Chain A
    Scientific Name Escherichia coli  
    Strain K12
    Details Four C Terminal Amino Acids Added Non Recombinantly with Native Chemical Ligation
    Gene male, b4034, jw3994
    Host Scientific Name Escherichia coli