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Crystal structure of orotidine 5'-monophosphate decarboxylase from Metallosphaera sedula
Biology and Chemistry Report
3VE9
  •   Structure Details   Hide

    Structure Keywords

    Keywords LYASE
    Text Metallosphaera sedula, tim barrel fold, orotidine 5'-monophosphate decarboxylase, LYASE

    Polymeric Molecules

    Chain A,B
    Description Orotidine-5'-phosphate decarboxylase 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 23434.3 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    PEG  DI(HYDROXYETHYL)ETHER  C4 H10 O3   106.12  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B A4YI54_METS5 A4YI54     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B  4.1.1.23      
    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    16829   Lyase Activity  Catalysis of the Cleavage of C C C O C N and Other Bonds by Other Means Than by Hydrolysis or Oxidation or Conversely Adding a Group to a Double Bond. They Differ From Other Enzymes in That Two Substrates Are Involved in One Reaction Direction But Only One in the Other Direction. When Acting On the Single Substrate a Molecule Is Eliminated and This Generates Either a New Double Bond or a New Ring. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Scientific Name Metallosphaera sedula  
    Strain ATCC 51363 / DSM 5348
    Gene msed_1966
    Host Scientific Name Escherichia coli