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Crystal structure of human AIM2 PYD domain with MBP fusion
Biology and Chemistry Report
3VD8
  •   Structure Details   Hide

    Structure Keywords

    Keywords SUGAR BINDING PROTEIN,SIGNALING PROTEIN
    Text MBP/PYD/DD, signal transduction, inflammasome, SUGAR BINDING PROTEIN,SIGNALING PROTEIN

    Polymeric Molecules

    Chain A
    Description Maltose-binding periplasmic protein, Interferon-inducible protein AIM2 
    Fragment PYD domain (UNP Residues 1-107) 
    Mutation D82A, K83A, E172A, N173A, K239A 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 53974.0 
    Source Method genetically manipulated  
    Entity Name MBP, MMBP, Maltodextrin-binding protein, Absent in melanoma 2 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    EDO  1,2-ETHANEDIOL  C2 H6 O2   62.07  View 
    POTASSIUM ION  K   39.10  View 
    MTT  MALTOTETRAOSE  C24 H42 O21   666.58  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A AIM2_HUMAN A8K7M7     
    A MALE_ECO57 P02928     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A
    GO ID   Ontology GO Term Definition
    6810   Transport  The Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells or Within a Multicellular Organism by Means of Some Agent Such As a Transporter or Pore. 
    8643   Carbohydrate Transport  The Directed Movement of Carbohydrate Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. Carbohydrates Are Any of a Group of Organic Compounds Based of the General Formula Cx(h2o)y. 
    15768   Maltose Transport  The Directed Movement of Maltose Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. Maltose Is the Disaccharide 4 O Alpha D Glucopyranosyl D Glucopyranose an Intermediate in the Catabolism of Glycogen and Starch. 
    42597   Periplasmic Space  The Region Between the Inner (cytoplasmic) and Outer Membrane (gram Negative Bacteria) or Cytoplasmic Membrane and Cell Wall (fungi and Gram Positive Bacteria). 
    5215   Transporter Activity  Enables the Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells. 
    5363   Maltose Transmembrane Transporter Activity  Catalysis of the Transfer of Maltose From One Side of the Membrane to the Other. Maltose Is the Disaccharide 4 O Alpha D Glucopyranosyl D Glucopyranose an Intermediate in the Enzymatic Breakdown of Glycogen and Starch. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Human
    Scientific Name Escherichia coli, homo sapiens  
    Strain O157:H7
    Gene aim2, ecs5017, male, mbp, z5632
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pET30a


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 1q22 9447     absent in melanoma 2 AIM2