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structure of p73 DNA binding domain tetramer modulates p73 transactivation
Biology and Chemistry Report
3VD2
  •   Structure Details   Hide

    Structure Keywords

    Keywords ANTITUMOR PROTEIN/DNA
    Text PROTEIN DNA COMPLEX, beta-immunoglobulin-like fold, TUMOUR SUPPRESSOR, DNA, ANTITUMOR PROTEIN-DNA complex

    Polymeric Molecules

    Chain A,B,C,D,I,J
    Description Tumor protein p73 
    Fragment unp residues 115-312 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 23776.1 
    Source Method genetically manipulated  
    Entity Name p53-like transcription factor, p53-related protein 
    Chain E,F,G,H,K,L
    Description DNA (5'-D(*AP*TP*GP*GP*AP*CP*AP*TP*GP*TP*CP*CP*AP*T)-3') 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 4279.8 
    Source Method synthetic  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    ZN  ZINC ION  Zn   65.41  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C,D,I,J P73_HUMAN B7Z7J4     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C,D,I,J
    GO ID   Ontology GO Term Definition
    6355   Regulation of Transcription DNA Templated  Any Process That Modulates the Frequency Rate or Extent of Cellular DNA Templated Transcription. 
    6915   Apoptotic Process  A Programmed Cell Death Process Which Begins When a Cell Receives an Internal (e.g. DNA Damage) or External Signal (e.g. an Extracellular Death Ligand) and Proceeds Through a Series of Biochemical Events (signaling Pathway Phase) Which Trigger an Execution Phase. the Execution Phase Is the Last Step of an Apoptotic Process and Is Typically Characterized by Rounding Up of the Cell Retraction of Pseudopodes Reduction of Cellular Volume (pyknosis) Chromatin Condensation Nuclear Fragmentation (karyorrhexis) Plasma Membrane Blebbing and Fragmentation of the Cell Into Apoptotic Bodies. When the Execution Phase Is Completed the Cell Has Died. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 
    3700   Sequence Specific DNA Binding Transcription Factor Activity  Interacting Selectively and Non Covalently with a Specific DNA Sequence in Order to Modulate Transcription. the Transcription Factor May or May Not Also Interact Selectively with a Protein or Macromolecular Complex. 
    44212   Transcription Regulatory Region DNA Binding  Interacting Selectively and Non Covalently with a DNA Region That Regulates the Transcription of a Region of DNA Which May Be a Gene Cistron or Operon. Binding May Occur As a Sequence Specific Interaction or As an Interaction Observed Only Once a Factor Has Been Recruited to the DNA by Other Factors. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C,D,I,J
    Common Name Human
    Scientific Name Homo sapiens  
    Host Scientific Name Escherichia coli  
    Host Strain Bl21


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 1p36.3 7161     tumor protein p73 TP73    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs148619697 LS-SNP   dbSNP   A 156 A - > T Bend 16% (Intermediate) 1 3638621