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Crystal Structure of C. Thermocellum PNKP Ligase Domain AMP-Adenylate
Biology and Chemistry Report
3TY9
  •   Structure Details   Hide

    Structure Keywords

    Keywords TRANSFERASE
    Text DNA ligase/mRNA capping enzyme, RNA Ligase, Adenylyltransferase, HEN1, TRANSFERASE

    Polymeric Molecules

    Chain A,B,C,D
    Description Polynucleotide 2',3'-cyclic phosphate phosphodiesterase / polynucleotide 5'-hydroxyl-kinase / polynucleotide 3'-phosphatase 
    Fragment Nucleotide Ligase 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 45101.1 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    AMP  ADENOSINE MONOPHOSPHATE  C10 H14 N5 O7 P   347.22  View 
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    MG  MAGNESIUM ION  Mg   24.31  View 
    MPD  (4S)-2-METHYL-2,4-PENTANEDIOL  C6 H14 O2   118.17  View 
    MRD  (4R)-2-METHYLPENTANE-2,4-DIOL  C6 H14 O2   118.17  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C,D A3DJ38_CLOTH A3DJ38     

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B C D  6.5.1.3      
     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C,D
    Scientific Name Clostridium thermocellum  
    Strain ATCC 27405
    Gene cthe_2768
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pET28b-smt3