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Structure of an S. pombe APTX/DNA/AMP/Zn complex
Biology and Chemistry Report
3SZQ
  •   Structure Details   Hide

    Structure Keywords

    Keywords HYDROLASE/DNA
    Text histidine triad (HIT), C2HE zinc finger, DNA repair, HYDROLASE-DNA complex

    Polymeric Molecules

    Chain A
    Description Aprataxin-like protein 
    Fragment APTX HIT-ZNF catalytic domain (UNP residues 31-232) 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(D) 
    Formula Weight 23897.6 
    Source Method genetically manipulated  
    Entity Name Hit family protein 3 
    Chain B
    Description 5'-D(*CP*CP*CP*TP*G)-3' 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 1456.0 
    Source Method synthetic  
    Chain C
    Description 5'-D(*TP*AP*TP*CP*GP*GP*AP*AP*TP*CP*AP*GP*GP*G)-3' 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 4344.9 
    Source Method synthetic  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    AMP  ADENOSINE MONOPHOSPHATE  C10 H14 N5 O7 P   347.22  View 
    BME  BETA-MERCAPTOETHANOL  C2 H6 O S   78.13  View 
    ZN  ZINC ION  Zn   65.41  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A APTX_SCHPO O74859     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    3      
     
  •   Gene Details   Hide

    Genetic Source

    Chain A
    Common Name Fission Yeast
    Scientific Name Schizosaccharomyces pombe  
    Strain ATCC 38366 / 972
    Gene hnt3, spcc18.09c
    Host Scientific Name Escherichia coli  


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    III - 2539198     aprataxin-like protein SPCC18.09C