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HIGH RESOLUTION SOLUTION NMR STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI-DIMENSIONAL NMR (SAC STRUCTURES)
Biology and Chemistry Report
3SAK
  •   Structure Details   Hide

    Structure Keywords

    Keywords APOPTOSIS/CELL CYCLE/GENE REGULATION
    Text ANTI-ONCOGENE, P53 DOMAIN, APOPTOSIS-CELL CYCLE-GENE REGULATION COMPLEX

    Polymeric Molecules

    Chain A,B,C,D
    Description PROTEIN (TUMOR SUPPRESSOR P53) 
    Fragment OLIGOMERIZATION DOMAIN, RESIDUES 319 - 360 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 4948.7 
    Source Method natural source  

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C,D P53_HUMAN P04637     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C,D
    GO ID   Ontology GO Term Definition
    6355   Regulation of Transcription DNA Templated  Any Process That Modulates the Frequency Rate or Extent of Cellular DNA Templated Transcription. 
    6915   Apoptotic Process  A Programmed Cell Death Process Which Begins When a Cell Receives an Internal (e.g. DNA Damage) or External Signal (e.g. an Extracellular Death Ligand) and Proceeds Through a Series of Biochemical Events (signaling Pathway Phase) Which Trigger an Execution Phase. the Execution Phase Is the Last Step of an Apoptotic Process and Is Typically Characterized by Rounding Up of the Cell Retraction of Pseudopodes Reduction of Cellular Volume (pyknosis) Chromatin Condensation Nuclear Fragmentation (karyorrhexis) Plasma Membrane Blebbing and Fragmentation of the Cell Into Apoptotic Bodies. When the Execution Phase Is Completed the Cell Has Died. 
    51262   Protein Tetramerization  The Formation of a Protein Tetramer a Macromolecular Structure Consisting of Four Noncovalently Associated Identical or Nonidentical Subunits. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 
    3700   Sequence Specific DNA Binding Transcription Factor Activity  Interacting Selectively and Non Covalently with a Specific DNA Sequence in Order to Modulate Transcription. the Transcription Factor May or May Not Also Interact Selectively with a Protein or Macromolecular Complex. 


     
  •   Gene Details   Hide

    Natural Source

    Chain A,B,C,D
    Common Name Human
    Scientific Name Homo sapiens  
    Genus Homo

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    17 17p13.1 7157     tumor protein p53 TP53    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs121912659 LS-SNP   dbSNP   A 7 G - > V Coil 24% (Intermediate) 17 7576872
    rs121912664 LS-SNP   dbSNP   A 19 R - > H Helix 13% (Intermediate) 17 7574017
    rs17882252 LS-SNP   dbSNP   A 21 E - > K Helix 35% (Intermediate) 17 7574012
    rs121912662 LS-SNP   dbSNP   A 26 L - > P Helix 0% (Buried) 17 7573996
    rs141402957 LS-SNP   dbSNP   A 33 K - > E Helix 22% (Intermediate) 17 7573976
    rs35993958 LS-SNP   dbSNP   A 42 G - > A Coil 149% (Exposed) 17 7573948