An Information Portal to 112722 Biological Macromolecular Structures

Crystal structure of Galacturonate Dehydratase from GEOBACILLUS SP. complexed with D-Galacturonate and 5-keto-4-deoxy-D-Galacturonate
Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Text Enolase fold, Galacturonate Dehydratase, METAL BINDING PROTEIN

    Polymeric Molecules

    Chain A,B,C,D
    Description Mandelate racemase/muconate lactonizing protein 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 43923.7 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    D54  4-deoxy-L-threo-hex-5-ulosuronic acid  C6 H8 O6   176.12  View 
    DGU  D-galacturonic acid  C6 H10 O7   194.14  View 
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    MG  MAGNESIUM ION  Mg   24.31  View 
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C,D D3EID5_GEOS4 D3EID5     

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C,D
    GO ID   Ontology GO Term Definition
    8152   Metabolic Process  The Chemical Reactions and Pathways Including Anabolism and Catabolism by Which Living Organisms Transform Chemical Substances. Metabolic Processes Typically Transform Small Molecules But Also Include Macromolecular Processes Such As DNA Repair and Replication and Protein Synthesis and Degradation. 
    3824   Catalytic Activity  Catalysis of a Biochemical Reaction At Physiological Temperatures. in Biologically Catalyzed Reactions the Reactants Are Known As Substrates and the Catalysts Are Naturally Occurring Macromolecular Substances Known As Enzymes. Enzymes Possess Specific Binding Sites For Substrates and Are Usually Composed Wholly or Largely of Protein But RNA That Has Catalytic Activity (ribozyme) Is Often Also Regarded As Enzymatic. 
    46872   Metal Ion Binding  Interacting Selectively and Non Covalently with Any Metal Ion. 

  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C,D
    Scientific Name Paenibacillus sp.  
    Strain Y412MC10
    Gene gymc10_3367
    Host Scientific Name Escherichia coli