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Structure of SopB(155-272)-18mer complex, P21 form
Biology and Chemistry Report
  •   Structure Details   Hide

    Structure Keywords

    Text partition, SopB, F plasmid, centromere, DNA-BINDING PROTEIN-DNA complex

    Polymeric Molecules

    Chain A,B,N,U
    Description Protein sopB 
    Fragment UNP residues 155 to 272 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 13268.1 
    Source Method genetically manipulated  
    Entity Name Plasmid partition protein B 
    Chain C,D,Y,Z
    Description DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3') 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 5517.6 
    Source Method synthetic  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    CA  CALCIUM ION  Ca   40.08  View 
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,N,U SOPB_ECOLI P08867     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,N,U
    GO ID   Ontology GO Term Definition
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 

  •   Gene Details   Hide

    Genetic Source

    Chain A,B,N,U
    Scientific Name Escherichia coli  
    Strain K-12
    Details Artificial Gene of Sopb
    Gene b, ecok12f047, f plasmid, sopb
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pET15b

    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    - - 1263559     sopB SOPB