POP-OUT | CLOSE
 
HIV Protease (PR) with inhibitor TL-3 and fragment hit 4D9 by soaking
Biology and Chemistry Report
3KFN
  •   Structure Details   Hide

    Structure Keywords

    Keywords HYDROLASE/HYDROLASE INHIBITOR
    Text HIV-1, PROTEASE, EXO SITE, Aspartyl protease, HYDROLASE-HYDROLASE INHIBITOR COMPLEX

    Polymeric Molecules

    Chain A,B
    Description Protease 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 10831.9 
    Source Method genetically manipulated  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    3TL  benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate  C50 H64 N6 O10   909.08  View 
    4DX  (1S,2S)-2-methylcyclohexanol  C7 H14 O   114.19  View 
    BME  BETA-MERCAPTOETHANOL  C2 H6 O S   78.13  View 
    DMS  DIMETHYL SULFOXIDE  C2 H6 O S   78.13  View 
    POTASSIUM ION  K   39.10  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B POL_HV1Z2 P12499     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    EC, Associated Pathways and Catalytic Sites

    Chain(s) IUBMB KEGG BioCyc
    A B  3.4.23.16      

    Protein Analyses

    Measured Binding Affinities   

     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Scientific Name Human immunodeficiency virus 1  
    Strain R8
    Gene pol
    Host Scientific Name Escherichia coli  
    Host Strain Bl21.de3
    Host Vector Type Plasmid
    Host Plasmid Name PET 21A+