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Crystal structure of the N-terminal fragment (28-126) of the human hepatocyte growth factor/scatter factor, trigonal crystal form
Biology and Chemistry Report
3HMT
  •   Structure Details   Hide

    Structure Keywords

    Keywords HORMONE
    Text HGF/SF, hormone/growth factor, Disulfide bond, Glycoprotein, Growth factor, Kringle, Pyrrolidone carboxylic acid, Serine protease homolog, HORMONE

    Polymeric Molecules

    Chain A,B
    Description Hepatocyte growth factor 
    Fragment N-terminal domain: UNP residues 28-126 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 11794.8 
    Source Method genetically manipulated  
    Entity Name Scatter factor, SF, Hepatopoeitin-A, Hepatocyte growth factor alpha chain, Hepatocyte growth factor beta chain 

     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B HGF_HUMAN P14210     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B
    Common Name Human
    Scientific Name Homo sapiens  
    Details Expressed As a Thioredoxin Fusion Protein
    Gene hgf, hpta
    Host Scientific Name Escherichia coli  
    Host Strain Origami B(de)
    Host Vector Type Plasmid
    Host Plasmid Name pET-Duet1/Trx


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    7 7q21.1 3082     hepatocyte growth factor (hepapoietin A; scatter factor) HGF    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs138927646 LS-SNP   dbSNP   A 43 K - > R Beta Ladder 39% (Exposed) 7 81392149
    rs150267054 LS-SNP   dbSNP   A 46 A - > V Beta Ladder 23% (Intermediate) 7 81392140
    rs142659098 LS-SNP   dbSNP   A 61 T - > N Beta Ladder 39% (Exposed) 7 81392095
    rs189052337 LS-SNP   dbSNP   A 93 R - > T Turn 64% (Exposed) 7 81388097
    rs151170133 LS-SNP   dbSNP   A 116 F - > Y Beta Ladder 19% (Intermediate) 7 81388028