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Crystal structure of the human TLR4-human MD-2-E.coli LPS Ra complex
Biology and Chemistry Report
3FXI
  •   Structure Details   Hide

    Structure Keywords

    Keywords IMMUNE SYSTEM
    Text Leucine Rich Repeat, Glycoprotein, Immune response, Inflammatory response, Innate immunity, Membrane, Receptor, Transmembrane, Secreted, IMMUNE SYSTEM

    Polymeric Molecules

    Chain A,B
    Description Toll-like receptor 4 
    Fragment extracellular domain, residues 27-631 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 68839.1 
    Source Method genetically manipulated  
    Entity Name TLR4, hToll 
    Chain C,D
    Description Lymphocyte antigen 96 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 16386.0 
    Source Method genetically manipulated  
    Entity Name MD-2, Protein MD-2, ESOP-1 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    DAO  LAURIC ACID  C12 H24 O2   200.32  View 
    FTT  3-HYDROXY-TETRADECANOIC ACID  C14 H28 O3   244.37  View 
    GCS  D-GLUCOSAMINE  C6 H13 N O5   179.17  View 
    GMH  L-GLYCERO-D-MANNO-HEPTOPYRANOSE  C7 H14 O7   210.18  View 
    KDO  3-DEOXY-D-MANNO-OCT-2-ULOSONIC ACID  C8 H14 O8   238.19  View 
    MG  MAGNESIUM ION  Mg   24.31  View 
    MYR  MYRISTIC ACID  C14 H28 O2   228.37  View 
    NAG  N-ACETYL-D-GLUCOSAMINE  C8 H15 N O6   221.21  View 
    PA1  2-amino-2-deoxy-alpha-D-glucopyranose  C6 H13 N O5   179.17  View 
    PO4  PHOSPHATE ION  O4 P   94.97  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B TLR4_HUMAN A8K1Y8     
    C,D LY96_HUMAN B3Y6A5     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B
    GO ID   Ontology GO Term Definition
    2755   Myd88 Dependent Toll Like Receptor Signaling Pathway  Any Series of Molecular Signals Generated As a Consequence of Binding to a Toll Like Receptor Where the Myd88 Adaptor Molecule Mediates Transduction of the Signal. Toll Like Receptors Directly Bind Pattern Motifs From a Variety of Microbial Sources to Initiate Innate Immune Response. 
    31663   Lipopolysaccharide Mediated Signaling Pathway  A Series of Molecular Signals Initiated by the Binding of a Lipopolysaccharide (lps) to a Receptor On the Surface of a Target Cell and Ending with Regulation of a Downstream Cellular Process E.g. Transcription. Lipopolysaccharides Are Major Components of the Outer Membrane of Gram Negative Bacteria Making Them Prime Targets For Recognition by the Immune System. 
    34142   Toll Like Receptor 4 Signaling Pathway  Any Series of Molecular Signals Generated As a Consequence of Binding to Toll Like Receptor 4. 
    42116   Macrophage Activation  A Change in Morphology and Behavior of a Macrophage Resulting From Exposure to a Cytokine Chemokine Cellular Ligand or Soluble Factor. 
    45087   Innate Immune Response  Innate Immune Responses Are Defense Responses Mediated by Germline Encoded Components That Directly Recognize Components of Potential Pathogens. 
    50707   Regulation of Cytokine Secretion  Any Process That Modulates the Frequency Rate or Extent of the Regulated Release of Cytokines From a Cell. 
    50829   Defense Response to Gram Negative Bacterium  Reactions Triggered in Response to the Presence of a Gram Negative Bacterium That Act to Protect the Cell or Organism. 
    16021   Integral Component of Membrane  The Component of a Membrane Consisting of Gene Products and Protein Complexes That Have Some Part That Penetrates At Least One Leaflet of the Membrane Bilayer. This Component Includes Gene Products That Are Buried in the Bilayer with No Exposure Outside the Bilayer. 
    46696   Lipopolysaccharide Receptor Complex  A Multiprotein Complex That Consists of At Least Three Proteins Cd14 Tlr4 and Md 2 Each of Which Is Glycosylated and Which Functions As a Lipopolysaccharide (lps) Receptor That Primes the Innate Immune Response Against Bacterial Pathogens. 
    1875   Lipopolysaccharide Receptor Activity  Combining with a Lipopolysaccharide and Transmitting the Signal Across the Cell Membrane to Initiate a Change in Cell Activity. Lipopolysaccharides (lps) Are Major Components of the Outer Membrane of Gram Negative Bacteria Making Them Prime Targets For Recognition by the Immune System. 
    4888   Transmembrane Signaling Receptor Activity  Combining with an Extracellular or Intracellular Signal and Transmitting the Signal From One Side of the Membrane to the Other to Initiate a Change in Cell Activity. 
    Chain C,D
    GO ID   Ontology GO Term Definition
    2224   Toll Like Receptor Signaling Pathway  Any Series of Molecular Signals Generated As a Consequence of Binding to a Toll Like Receptor. Toll Like Receptors Directly Bind Pattern Motifs From a Variety of Microbial Sources to Initiate Innate Immune Response. 
    2376   Immune System Process  Any Process Involved in the Development or Functioning of the Immune System an Organismal System For Calibrated Responses to Potential Internal or Invasive Threats. 
    2755   Myd88 Dependent Toll Like Receptor Signaling Pathway  Any Series of Molecular Signals Generated As a Consequence of Binding to a Toll Like Receptor Where the Myd88 Adaptor Molecule Mediates Transduction of the Signal. Toll Like Receptors Directly Bind Pattern Motifs From a Variety of Microbial Sources to Initiate Innate Immune Response. 
    2756   Myd88 Independent Toll Like Receptor Signaling Pathway  Any Series of Molecular Signals Generated As a Consequence of Binding to a Toll Like Receptor Not Relying On the Myd88 Adaptor Molecule. Toll Like Receptors Directly Bind Pattern Motifs From a Variety of Microbial Sources to Initiate Innate Immune Response. 
    6954   Inflammatory Response  The Immediate Defensive Reaction (by Vertebrate Tissue) to Infection or Injury Caused by Chemical or Physical Agents. the Process Is Characterized by Local Vasodilation Extravasation of Plasma Into Intercellular Spaces and Accumulation of White Blood Cells and Macrophages. 
    6968   Cellular Defense Response  A Defense Response That Is Mediated by Cells. 
    7166   Cell Surface Receptor Signaling Pathway  A Series of Molecular Signals Initiated by Activation of a Receptor On the Surface of a Cell. the Pathway Begins with Binding of an Extracellular Ligand to a Cell Surface Receptor or For Receptors That Signal in the Absence of a Ligand by Ligand Withdrawal or the Activity of a Constitutively Active Receptor. the Pathway Ends with Regulation of a Downstream Cellular Process E.g. Transcription. 
    7249   I Kappab Kinase/nf Kappab Signaling  The Process in Which a Signal Is Passed On to Downstream Components Within the Cell Through the I Kappab Kinase (ikk) Dependent Activation of Nf Kappab. the Cascade Begins with Activation of a Trimeric Ikk Complex (consisting of Catalytic Kinase Subunits Ikkalpha And/or Ikkbeta and the Regulatory Scaffold Protein Nemo) and Ends with the Regulation of Transcription of Target Genes by Nf Kappab. in a Resting State Nf Kappab Dimers Are Bound to I Kappab Proteins Sequestering Nf Kappab in the Cytoplasm. Phosphorylation of I Kappab Targets I Kappab For Ubiquitination and Proteasomal Degradation Thus Releasing the Nf Kappab Dimers Which Can Translocate to the Nucleus to Bind DNA and Regulate Transcription. 
    31663   Lipopolysaccharide Mediated Signaling Pathway  A Series of Molecular Signals Initiated by the Binding of a Lipopolysaccharide (lps) to a Receptor On the Surface of a Target Cell and Ending with Regulation of a Downstream Cellular Process E.g. Transcription. Lipopolysaccharides Are Major Components of the Outer Membrane of Gram Negative Bacteria Making Them Prime Targets For Recognition by the Immune System. 
    31666   Positive Regulation of Lipopolysaccharide Mediated Signaling Pathway  Any Process That Activates or Increases the Frequency Rate or Extent of Signaling in Response to Detection of Lipopolysaccharide. 
    32496   Response to Lipopolysaccharide  Any Process That Results in a Change in State or Activity of an Organism (in Terms of Movement Secretion Enzyme Production Gene Expression Etc.) As a Result of a Lipopolysaccharide Stimulus; Lipopolysaccharide Is a Major Component of the Cell Wall of Gram Negative Bacteria. 
    32497   Detection of Lipopolysaccharide  The Series of Events in Which a Lipopolysaccharide Stimulus Is Received by a Cell and Converted Into a Molecular Signal. Lipopolysaccharide Is a Major Component of the Cell Wall of Gram Negative Bacteria. 
    34134   Toll Like Receptor 2 Signaling Pathway  Any Series of Molecular Signals Generated As a Consequence of Binding to Toll Like Receptor 2. 
    34138   Toll Like Receptor 3 Signaling Pathway  Any Series of Molecular Signals Generated As a Consequence of Binding to Toll Like Receptor 3. 
    34142   Toll Like Receptor 4 Signaling Pathway  Any Series of Molecular Signals Generated As a Consequence of Binding to Toll Like Receptor 4. 
    35666   Trif Dependent Toll Like Receptor Signaling Pathway  Any Series of Molecular Signals Generated As a Consequence of Binding to a Toll Like Receptor Where the Trif Adaptor Mediates Transduction of the Signal. Toll Like Receptors Directly Bind Pattern Motifs From a Variety of Microbial Sources to Initiate Innate Immune Response. 
    38123   Toll Like Receptor Tlr1:tlr2 Signaling Pathway  A Series of Molecular Signals Initiated by the Binding of a Heterodimeric Tlr1:tlr2 Complex to One of It's Physiological Ligands Followed by Transmission of the Signal by the Activated Receptor and Ending with Regulation of a Downstream Cellular Process E.g. Transcription. 
    38124   Toll Like Receptor Tlr6:tlr2 Signaling Pathway  A Series of Molecular Signals Initiated by the Binding of a Heterodimeric Tlr6:tlr2 Complex to One of It's Physiological Ligands Followed by Transmission of the Signal by the Activated Receptor and Ending with Regulation of a Downstream Cellular Process E.g. Transcription. 
    45087   Innate Immune Response  Innate Immune Responses Are Defense Responses Mediated by Germline Encoded Components That Directly Recognize Components of Potential Pathogens. 
    5576   Extracellular Region  The Space External to the Outermost Structure of a Cell. For Cells Without External Protective or External Encapsulating Structures This Refers to Space Outside of the Plasma Membrane. This Term Covers the Host Cell Environment Outside an Intracellular Parasite. 
    5615   Extracellular Space  That Part of a Multicellular Organism Outside the Cells Proper Usually Taken to Be Outside the Plasma Membranes and Occupied by Fluid. 
    5886   Plasma Membrane  The Membrane Surrounding a Cell That Separates the Cell From Its External Environment. It Consists of a Phospholipid Bilayer and Associated Proteins. 
    10008   Endosome Membrane  The Lipid Bilayer Surrounding an Endosome. 
    46696   Lipopolysaccharide Receptor Complex  A Multiprotein Complex That Consists of At Least Three Proteins Cd14 Tlr4 and Md 2 Each of Which Is Glycosylated and Which Functions As a Lipopolysaccharide (lps) Receptor That Primes the Innate Immune Response Against Bacterial Pathogens. 
    1875   Lipopolysaccharide Receptor Activity  Combining with a Lipopolysaccharide and Transmitting the Signal Across the Cell Membrane to Initiate a Change in Cell Activity. Lipopolysaccharides (lps) Are Major Components of the Outer Membrane of Gram Negative Bacteria Making Them Prime Targets For Recognition by the Immune System. 
    5515   Protein Binding  Interacting Selectively and Non Covalently with Any Protein or Protein Complex (a Complex of Two or More Proteins That May Include Other Nonprotein Molecules). 
    15026   Coreceptor Activity  Combining with an Extracellular or Intracellular Messenger and in Cooperation with a Nearby Primary Receptor Initiating a Change in Cell Activity. 


     
  •   Gene Details   Hide

    Natural Source

    Chain null
    Scientific Name Escherichia coli  
    Strain RA MUTANT

    Genetic Source

    Chain C,D
    Common Name Human
    Scientific Name Homo sapiens  
    Gene esop1, ly96, md-2, md2
    Host Scientific Name Trichoplusia ni  
    Host Cell Type High Five Cells
    Host Vector Type Baculovirus
    Host Plasmid Name pAcGP67A


    Chain A,B
    Common Name Human
    Scientific Name Homo sapiens  
    Gene tlr4
    Host Scientific Name Trichoplusia ni  
    Host Cell Type High Five Cells
    Host Vector Type Baculovirus
    Host Plasmid Name pAcGP67A


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    8 8q21.11 23643     lymphocyte antigen 96 LY96    
    9 9q33.1 7099     toll-like receptor 4 TLR4    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs200144068 LS-SNP   dbSNP   A 27 E - > Q Coil 74% (Exposed) 9 120466829
    rs200405562 LS-SNP   dbSNP   A 33 V - > L Beta Ladder 45% (Exposed) 9 120470844
    rs201589239 LS-SNP   dbSNP   A 39 Q - > H Beta Ladder 37% (Exposed) 9 120470864
    rs199632734 LS-SNP   dbSNP   A 41 M - > V Coil 15% (Intermediate) 9 120470868
    rs78848399 LS-SNP   dbSNP   A 46 Y - > C Bend 55% (Exposed) 9 120470884 DAO,FTT,MYR
    rs148151027 LS-SNP   dbSNP   A 51 N - > K Bend 41% (Exposed) 9 120470900
    rs200606970 LS-SNP   dbSNP   A 71 S - > N Turn 55% (Exposed) 9 120470959 FTT,MYR
    rs147453131 LS-SNP   dbSNP   A 73 S - > R Coil 17% (Intermediate) 9 120470966
    rs141943958 LS-SNP   dbSNP   A 91 Q - > R Coil 51% (Exposed) 9 120474678
    rs202017929 LS-SNP   dbSNP   A 92 T - > A Beta Ladder 22% (Intermediate) 9 120474680 DAO,FTT,MYR
    rs56302444 LS-SNP   dbSNP   A 93 I - > V Beta Ladder 1% (Buried) 9 120474683
    rs111301110 LS-SNP   dbSNP   A 99 Q - > R Turn 35% (Intermediate) 9 120474702
    rs201613484 LS-SNP   dbSNP   A 104 L - > F Coil 0% (Buried) 9 120474716 FTT,MYR
    rs200381375 LS-SNP   dbSNP   A 108 I - > T Beta Ladder 17% (Intermediate) 9 120474729
    rs199508096 LS-SNP   dbSNP   A 118 A - > T Coil 14% (Intermediate) 9 120474758 GMH,KDO,PA1,FTT,MYR,PO4
    rs199985705 LS-SNP   dbSNP   A 121 A - > S Turn 0% (Buried) 9 120474767 GMH,KDO,PA1,FTT,DAO
    rs188543451 LS-SNP   dbSNP   A 138 L - > P Coil 10% (Intermediate) 9 120474819
    rs201897073 LS-SNP   dbSNP   A 146 I - > T Turn 0% (Buried) 9 120474843 FTT,MYR
    rs146175330 LS-SNP   dbSNP   A 157 V - > M Coil 0% (Buried) 9 120474875
    rs200168998 LS-SNP   dbSNP   A 162 I - > T Coil 2% (Buried) 9 120474891
    rs201912905 LS-SNP   dbSNP   A 169 E - > D 3/10 Helix 45% (Exposed) 9 120474913
    rs16906079 LS-SNP   dbSNP   A 175 T - > A Turn 67% (Exposed) 9 120474929
    rs201215262 LS-SNP   dbSNP   A 179 H - > Y Beta Ladder 48% (Exposed) 9 120474941 NAG
    rs77214890 LS-SNP   dbSNP   A 181 D - > Y Beta Ladder 22% (Intermediate) 9 120474947
    rs5030713 LS-SNP   dbSNP   A 188 Q - > R Coil 48% (Exposed) 9 120474969
    rs200570847 LS-SNP   dbSNP   A 196 R - > Q Turn 41% (Exposed) 9 120474993
    rs201943367 LS-SNP   dbSNP   A 196 R - > W Turn 41% (Exposed) 9 120474992
    rs201466683 LS-SNP   dbSNP   A 201 M - > V Coil 13% (Intermediate) 9 120475007
    rs201793594 LS-SNP   dbSNP   A 204 L - > F Coil 20% (Intermediate) 9 120475016
    rs200195902 LS-SNP   dbSNP   A 205 N - > IS Coil 53% (Exposed) 9 120475020 NAG
    rs200246890 LS-SNP   dbSNP   A 205 N - > DH Coil 53% (Exposed) 9 120475019 NAG
    rs201521400 LS-SNP   dbSNP   A 237 F - > L Coil 10% (Intermediate) 9 120475117
    rs5030714 LS-SNP   dbSNP   A 246 C - > S Helix 0% (Buried) 9 120475143
    rs201835255 LS-SNP   dbSNP   A 257 R - > S Beta Ladder 16% (Intermediate) 9 120475175
    rs199666264 LS-SNP   dbSNP   A 257 R - > H Beta Ladder 16% (Intermediate) 9 120475176
    rs200527106 LS-SNP   dbSNP   A 258 L - > F Beta Ladder 0% (Buried) 9 120475180
    rs55799839 LS-SNP   dbSNP   A 260 L - > P Beta Ladder 4% (Buried) 9 120475185
    rs142144857 LS-SNP   dbSNP   A 274 K - > RT Turn 63% (Exposed) 9 120475227
    rs199885534 LS-SNP   dbSNP   A 276 A - > S Turn 1% (Buried) 9 120475232
    rs137853920 LS-SNP   dbSNP   A 281 C - > Y 3/10 Helix 48% (Exposed) 9 120475248
    rs201836189 LS-SNP   dbSNP   A 283 L - > S Bend 10% (Intermediate) 9 120475254
    rs201497570 LS-SNP   dbSNP   A 284 T - > S Beta Ladder 59% (Exposed) 9 120475256
    rs76014534 LS-SNP   dbSNP   A 287 E - > G Beta Ladder 25% (Intermediate) 9 120475266
    rs200276033 LS-SNP   dbSNP   A 289 R - > Q Beta Ladder 4% (Buried) 9 120475272
    rs139736045 LS-SNP   dbSNP   A 294 D - > N Bend 48% (Exposed) 9 120475286 GMH,PO4,MG
    rs145284280 LS-SNP   dbSNP   A 298 D - > N Coil 47% (Exposed) 9 120475298
    rs4986790 LS-SNP   dbSNP   A 299 D - > G Coil 24% (Intermediate) 9 120475302
    rs141534085 LS-SNP   dbSNP   A 301 I - > V Turn 20% (Intermediate) 9 120475307
    rs201050092 LS-SNP   dbSNP   A 301 I - > T Turn 20% (Intermediate) 9 120475308
    rs2770145 LS-SNP   dbSNP   A 306 C - > W 3/10 Helix 14% (Intermediate) 9 120475324
    rs2770144 LS-SNP   dbSNP   A 310 V - > G Coil 2% (Buried) 9 120475335
    rs199637440 LS-SNP   dbSNP   A 315 L - > M Beta Ladder 1% (Buried) 9 120475349
    rs200308453 LS-SNP   dbSNP   A 322 R - > K Turn 56% (Exposed) 9 120475371 GMH,PO4
    rs5030715 LS-SNP   dbSNP   A 329 N - > S Coil 50% (Exposed) 9 120475392
    rs5031050 LS-SNP   dbSNP   A 342 F - > Y Coil 3% (Buried) 9 120475431
    rs200713994 LS-SNP   dbSNP   A 343 G - > V Bend 33% (Intermediate) 9 120475434
    rs201709345 LS-SNP   dbSNP   A 344 Q - > R Bend 74% (Exposed) 9 120475437
    rs200307408 LS-SNP   dbSNP   A 350 L - > F Coil 3% (Buried) 9 120475454
    rs148638298 LS-SNP   dbSNP   A 353 L - > F Coil 0% (Buried) 9 120475463
    rs61734367 LS-SNP   dbSNP   A 361 N - > D Coil 4% (Buried) 9 120475487
    rs201114738 LS-SNP   dbSNP   A 381 S - > G Coil 1% (Buried) 9 120475547
    rs201331711 LS-SNP   dbSNP   A 382 R - > K Bend 49% (Exposed) 9 120475551
    rs11536884 LS-SNP   dbSNP   A 385 L - > F Coil 0% (Buried) 9 120475561
    rs201746544 LS-SNP   dbSNP   A 389 G - > CS Beta Ladder 21% (Intermediate) 9 120475571
    rs79802422 LS-SNP   dbSNP   A 395 D - > V Helix 15% (Intermediate) 9 120475590
    rs200301169 LS-SNP   dbSNP   A 398 T - > A Coil 1% (Buried) 9 120475598
    rs4986791 LS-SNP   dbSNP   A 399 T - > I Bend 47% (Exposed) 9 120475602
    rs4987233 LS-SNP   dbSNP   A 400 S - > N Coil 27% (Intermediate) 9 120475605
    rs202089517 LS-SNP   dbSNP   A 407 S - > T Coil 2% (Buried) 9 120475626
    rs145887797 LS-SNP   dbSNP   A 411 V - > I Beta Ladder 6% (Buried) 9 120475637
    rs137906784 LS-SNP   dbSNP   A 421 L - > V Coil 1% (Buried) 9 120475667
    rs142298021 LS-SNP   dbSNP   A 438 S - > N Beta 11% (Intermediate) 9 120475719
    rs199561420 LS-SNP   dbSNP   A 441 S - > L Beta 8% (Buried) 9 120475728 FTT
    rs5030716 LS-SNP   dbSNP   A 443 F - > L Turn 1% (Buried) 9 120475735
    rs201456149 LS-SNP   dbSNP   A 453 D - > G Beta Ladder 2% (Buried) 9 120475764
    rs199663534 LS-SNP   dbSNP   A 464 N - > D Turn 41% (Exposed) 9 120475796
    rs80197996 LS-SNP   dbSNP   A 470 L - > F Coil 0% (Buried) 9 120475816
    rs5030718 LS-SNP   dbSNP   A 474 E - > K Coil 35% (Intermediate) 9 120475826
    rs200621504 LS-SNP   dbSNP   A 481 N - > S Coil 4% (Buried) 9 120475848
    rs200787883 LS-SNP   dbSNP   A 492 F - > V Coil 0% (Buried) 9 120475880
    rs144562288 LS-SNP   dbSNP   A 493 T - > I Turn 54% (Exposed) 9 120475884
    rs199891172 LS-SNP   dbSNP   A 505 Q - > R Turn 45% (Exposed) 9 120475920 NAG
    rs5030719 LS-SNP   dbSNP   A 510 Q - > H Bend 51% (Exposed) 9 120475936
    rs202114774 LS-SNP   dbSNP   A 519 L - > V Coil 1% (Buried) 9 120475961
    rs34953464 LS-SNP   dbSNP   A 532 F - > L Coil 4% (Buried) 9 120476002
    rs151068160 LS-SNP   dbSNP   A 537 T - > M Coil 1% (Buried) 9 120476016
    rs202101018 LS-SNP   dbSNP   A 555 H - > N Coil 22% (Intermediate) 9 120476069
    rs149793266 LS-SNP   dbSNP   A 562 Q - > R Coil 49% (Exposed) 9 120476091
    rs200473735 LS-SNP   dbSNP   A 564 L - > I Turn 8% (Buried) 9 120476096
    rs201413217 LS-SNP   dbSNP   A 565 Q - > K Turn 69% (Exposed) 9 120476099
    rs199503502 LS-SNP   dbSNP   A 572 A - > P Coil 42% (Exposed) 9 120476120
    rs200676661 LS-SNP   dbSNP   A 572 A - > V Coil 42% (Exposed) 9 120476121
    rs201204460 LS-SNP   dbSNP   A 582 A - > S Coil 5% (Buried) 9 120476150
    rs199700911 LS-SNP   dbSNP   A 587 H - > Q 3/10 Helix 22% (Intermediate) 9 120476167
    rs200131163 LS-SNP   dbSNP   A 602 V - > LM Coil 27% (Intermediate) 9 120476210 NAG
    rs201656097 LS-SNP   dbSNP   A 616 Q - > R Coil 68% (Exposed) 9 120476253
    rs146859162 LS-SNP   dbSNP   A 622 S - > N Bend 49% (Exposed) 9 120476271
    rs199948408 LS-SNP   dbSNP   A 624 N - > T Coil 84% (Exposed) 9 120476277
    rs202124250 LS-SNP   dbSNP   A 624 N - > H Coil 84% (Exposed) 9 120476276
    rs201055270 LS-SNP   dbSNP   A 626 T - > I Coil 83% (Exposed) 9 120476283
    rs199978698 LS-SNP   dbSNP   C 29 D - > N Bend 10% (Intermediate) 8 74903762
    rs147043603 LS-SNP   dbSNP   C 42 Y - > C Coil 14% (Intermediate) 8 74917043
    rs6472812 LS-SNP   dbSNP   C 56 R - > G Coil 21% (Intermediate) 8 74917084
    rs149129453 LS-SNP   dbSNP   C 68 R - > K Bend 9% (Buried) 8 74922236
    rs142571384 LS-SNP   dbSNP   C 70 D - > Y Coil 32% (Intermediate) 8 74922241
    rs199845476 LS-SNP   dbSNP   C 84 T - > S Turn 95% (Exposed) 8 74922284
    rs143608308 LS-SNP   dbSNP   C 85 M - > I Beta Ladder 18% (Intermediate) 8 74922288
    rs199848357 LS-SNP   dbSNP   C 96 R - > Q Coil 41% (Exposed) 8 74922320
    rs141759642 LS-SNP   dbSNP   C 142 P - > L Turn 68% (Exposed) 8 74941231
    rs202107994 LS-SNP   dbSNP   C 143 E - > A Turn 47% (Exposed) 8 74941234
    rs11466004 LS-SNP   dbSNP   C 157 P - > S Coil 35% (Intermediate) 8 74941275