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An Information Portal to 105097 Biological Macromolecular Structures

CSL (RBP-Jk) bound to DNA
Biology and Chemistry Report
3BRG
  •   Structure Details   Hide

    Structure Keywords

    Keywords DNA BINDING PROTEIN/DNA
    Text protein-DNA complex, signaling, transcription, Notch, Activator, DNA-binding, Notch signaling pathway, Nucleus, Repressor, Transcription regulation, DNA BINDING PROTEIN-DNA COMPLEX

    Polymeric Molecules

    Chain A
    Description DNA (5'-D(*DAP*DAP*DTP*DCP*DTP*DTP*DTP*DCP*DCP*DCP*DAP*DCP*DAP*DGP*DT)-3') 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 4504.0 
    Source Method synthetic  
    Chain B
    Description DNA (5'-D(*DTP*DTP*DAP*DCP*DTP*DGP*DTP*DGP*DGP*DGP*DAP*DAP*DAP*DGP*DA)-3') 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 4673.1 
    Source Method synthetic  
    Chain C
    Description Recombining binding protein suppressor of hairless 
    Fragment core domain 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 48281.6 
    Source Method genetically manipulated  
    Entity Name J kappa-recombination signal-binding protein, RBP-J kappa 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    EDO  1,2-ETHANEDIOL  C2 H6 O2   62.07  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    C SUH_MOUSE P31266     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain C
    GO ID   Ontology GO Term Definition
    6355   Regulation of Transcription DNA Templated  Any Process That Modulates the Frequency Rate or Extent of Cellular DNA Templated Transcription. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    978   RNA Polymerase Ii Core Promoter Proximal Region Sequence Specific DNA Binding  Interacting Selectively and Non Covalently with a Sequence of DNA That Is in Cis with and Relatively Close to a Core Promoter For RNA Polymerase Ii. 
    982   RNA Polymerase Ii Core Promoter Proximal Region Sequence Specific DNA Binding Transcription Factor Activity  Interacting Selectively and Non Covalently with a Sequence of DNA That Is in Cis with and Relatively Close to a Core Promoter For RNA Polymerase Ii (rnap Ii) in Order to Modulate Transcription by Rnap Ii. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 
    3700   Sequence Specific DNA Binding Transcription Factor Activity  Interacting Selectively and Non Covalently with a Specific DNA Sequence in Order to Modulate Transcription. the Transcription Factor May or May Not Also Interact Selectively with a Protein or Macromolecular Complex. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain C
    Common Name House Mouse
    Scientific Name Mus musculus  
    Genus Mus
    Gene rbpj, igkjrb1, igkrsbp, rbpsuh
    Host Scientific Name Escherichia coli  
    Host Genus Escherichia
    Host Strain Rosetta2(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pGEX6P-1


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    5 5 C1-C3|5 29.37 cM 19664     recombination signal binding protein for immunoglobulin kappa J region RBPJ