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An Information Portal to 111558 Biological Macromolecular Structures

The human nucleosome structure
Biology and Chemistry Report
3AFA
  •   Structure Details   Hide

    Structure Keywords

    Keywords STRUCTURAL PROTEIN/DNA
    Text histone-fold, DNA-binding protein, Chromosomal protein, Citrullination, DNA-binding, Methylation, Nucleosome core, Nucleus, Phosphoprotein, Isopeptide bond, Antibiotic, Antimicrobial, STRUCTURAL PROTEIN-DNA complex

    Polymeric Molecules

    Chain A,E
    Description Histone H3.1 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 15719.6 
    Source Method genetically manipulated  
    Entity Name Histone H3/a, Histone H3/b, Histone H3/c, Histone H3/d, Histone H3/f, Histone H3/h, Histone H3/i, Histone H3/j, Histone H3/k, Histone H3/l 
    Chain B,F
    Description Histone H4 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 11676.8 
    Source Method genetically manipulated  
    Chain C,G
    Description Histone H2A type 1-B/E 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 14448.0 
    Source Method genetically manipulated  
    Entity Name Histone H2A/m, Histone H2A/a, Histone H2A.2 
    Chain D,H
    Description Histone H2B type 1-J 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 14217.6 
    Source Method genetically manipulated  
    Entity Name Histone H2B.r, H2B/r, Histone H2B.1 
    Chain I,J
    Description 146-MER DNA 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polydeoxyribonucleotide 
    Formula Weight 45054.2 
    Source Method synthetic  

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    CL  CHLORIDE ION  Cl   35.45  View 
    MN  MANGANESE (II) ION  Mn   54.94  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,E H31_HUMAN P68431     
    B,F H4_HUMAN P62805     
    C,G H2A1B_HUMAN P04908     
    D,H H2B1J_HUMAN P06899     

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,E
    GO ID   Ontology GO Term Definition
    183   Chromatin Silencing At Rdna  Repression of Transcription of Ribosomal DNA by Altering the Structure of Chromatin. 
    2230   Positive Regulation of Defense Response to Virus by Host  Any Host Process That Results in the Promotion of Antiviral Immune Response Mechanisms Thereby Limiting Viral Replication. 
    6325   Chromatin Organization  Any Process That Results in the Specification Formation or Maintenance of the Physical Structure of Eukaryotic Chromatin. 
    6334   Nucleosome Assembly  The Aggregation Arrangement and Bonding Together of a Nucleosome the Beadlike Structural Units of Eukaryotic Chromatin Composed of Histones and Dna. 
    6335   DNA Replication Dependent Nucleosome Assembly  The Formation of Nucleosomes On Newly Replicated DNA Coupled to Strand Elongation. 
    7264   Small Gtpase Mediated Signal Transduction  Any Series of Molecular Signals in Which a Small Monomeric Gtpase Relays One or More of the Signals. 
    7596   Blood Coagulation  The Sequential Process in Which the Multiple Coagulation Factors of the Blood Interact Ultimately Resulting in the Formation of an Insoluble Fibrin Clot; It May Be Divided Into Three Stages: Stage 1 the Formation of Intrinsic and Extrinsic Prothrombin Converting Principle; Stage 2 the Formation of Thrombin; Stage 3 the Formation of Stable Fibrin Polymers. 
    10467   Gene Expression  The Process in Which a Gene's Sequence Is Converted Into a Mature Gene Product or Products (proteins or Rna). This Includes the Production of an RNA Transcript As Well As Any Processing to Produce a Mature RNA Product or an MRNA (for Protein Coding Genes) and the Translation of That MRNA Into Protein. Protein Maturation Is Included When Required to Form an Active Form of a Product From an Inactive Precursor Form. 
    32776   DNA Methylation On Cytosine  The Covalent Transfer of a Methyl Group to C 5 or N 4 of Cytosine in a DNA Molecule. 
    40029   Regulation of Gene Expression Epigenetic  Any Process That Modulates the Frequency Rate or Extent of Gene Expression; the Process Is Mitotically or Meiotically Heritable or Is Stably Self Propagated in the Cytoplasm of a Resting Cell and Does Not Entail a Change in DNA Sequence. 
    45814   Negative Regulation of Gene Expression Epigenetic  Any Epigenetic Process That Stops Prevents or Reduces the Rate of Gene Expression. 
    51290   Protein Heterotetramerization  The Formation of a Protein Heterotetramer a Macromolecular Structure Consisting of Four Noncovalently Associated Subunits of Which Not All Are Identical. 
    60968   Regulation of Gene Silencing  Any Process That Modulates the Rate Frequency or Extent of Gene Silencing the Transcriptional or Post Transcriptional Process Carried Out At the Cellular Level That Results in Long Term Gene Inactivation. 
    228   Nuclear Chromosome  A Chromosome Found in the Nucleus of a Eukaryotic Cell. 
    786   Nucleosome  A Complex Comprised of DNA Wound Around a Multisubunit Core and Associated Proteins Which Forms the Primary Packing Unit of DNA Into Higher Order Structures. 
    788   Nuclear Nucleosome  A Complex Comprised of DNA Wound Around a Multisubunit Core and Associated Proteins Which Forms the Primary Packing Unit of DNA in the Nucleus Into Higher Order Structures. 
    5576   Extracellular Region  The Space External to the Outermost Structure of a Cell. For Cells Without External Protective or External Encapsulating Structures This Refers to Space Outside of the Plasma Membrane. This Term Covers the Host Cell Environment Outside an Intracellular Parasite. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    5654   Nucleoplasm  That Part of the Nuclear Content Other Than the Chromosomes or the Nucleolus. 
    5694   Chromosome  A Structure Composed of a Very Long Molecule of DNA and Associated Proteins (e.g. Histones) That Carries Hereditary Information. 
    16020   Membrane  A Lipid Bilayer Along with All the Proteins and Protein Complexes Embedded in It an Attached to It. 
    43234   Protein Complex  A Stable Macromolecular Complex Composed (only) of Two or More Polypeptide Subunits Along with Any Covalently Attached Molecules (such As Lipid Anchors or Oligosaccharide) or Non Protein Prosthetic Groups (such As Nucleotides or Metal Ions). Prosthetic Group in This Context Refers to a Tightly Bound Cofactor. the Component Polypeptide Subunits May Be Identical. 
    70062   Extracellular Exosome  A Membrane Bounded Vesicle That Is Released Into the Extracellular Region by Fusion of the Limiting Endosomal Membrane of a Multivesicular Body with the Plasma Membrane. Extracellular Exosomes Also Simply Called Exosomes Have a Diameter of About 40 100 Nm. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 
    5515   Protein Binding  Interacting Selectively and Non Covalently with Any Protein or Protein Complex (a Complex of Two or More Proteins That May Include Other Nonprotein Molecules). 
    42393   Histone Binding  Interacting Selectively and Non Covalently with a Histone Any of a Group of Water Soluble Proteins Found in Association with the DNA of Plant and Animal Chromosomes. They Are Involved in the Condensation and Coiling of Chromosomes During Cell Division and Have Also Been Implicated in Nonspecific Suppression of Gene Activity. 
    46982   Protein Heterodimerization Activity  Interacting Selectively and Non Covalently with a Nonidentical Protein to Form a Heterodimer. 
    Chain B,F
    GO ID   Ontology GO Term Definition
    183   Chromatin Silencing At Rdna  Repression of Transcription of Ribosomal DNA by Altering the Structure of Chromatin. 
    278   Mitotic Cell Cycle  Progression Through the Phases of the Mitotic Cell Cycle the Most Common Eukaryotic Cell Cycle Which Canonically Comprises Four Successive Phases Called G1 S G2 and M and Includes Replication of the Genome and the Subsequent Segregation of Chromosomes Into Daughter Cells. in Some Variant Cell Cycles Nuclear Replication or Nuclear Division May Not Be Followed by Cell Division or G1 and G2 Phases May Be Absent. 
    723   Telomere Maintenance  Any Process That Contributes to the Maintenance of Proper Telomeric Length and Structure by Affecting and Monitoring the Activity of Telomeric Proteins and the Length of Telomeric Dna. These Processes Includes Those That Shorten and Lengthen the Telomeric DNA Sequences. 
    6325   Chromatin Organization  Any Process That Results in the Specification Formation or Maintenance of the Physical Structure of Eukaryotic Chromatin. 
    6334   Nucleosome Assembly  The Aggregation Arrangement and Bonding Together of a Nucleosome the Beadlike Structural Units of Eukaryotic Chromatin Composed of Histones and Dna. 
    6335   DNA Replication Dependent Nucleosome Assembly  The Formation of Nucleosomes On Newly Replicated DNA Coupled to Strand Elongation. 
    6336   DNA Replication Independent Nucleosome Assembly  The Formation of Nucleosomes Outside the Context of DNA Replication. 
    6352   DNA Templated Transcription Initiation  Any Process Involved in the Assembly of the RNA Polymerase Preinitiation Complex (pic) At the Core Promoter Region of a DNA Template Resulting in the Subsequent Synthesis of RNA From That Promoter. the Initiation Phase Includes Pic Assembly and the Formation of the First Few Bonds in the RNA Chain Including Abortive Initiation Which Occurs When the First Few Nucleotides Are Repeatedly Synthesized and Then Released. the Initiation Phase Ends Just Before and Does Not Include Promoter Clearance or Release Which Is the Transition Between the Initiation and Elongation Phases of Transcription. 
    7264   Small Gtpase Mediated Signal Transduction  Any Series of Molecular Signals in Which a Small Monomeric Gtpase Relays One or More of the Signals. 
    10467   Gene Expression  The Process in Which a Gene's Sequence Is Converted Into a Mature Gene Product or Products (proteins or Rna). This Includes the Production of an RNA Transcript As Well As Any Processing to Produce a Mature RNA Product or an MRNA (for Protein Coding Genes) and the Translation of That MRNA Into Protein. Protein Maturation Is Included When Required to Form an Active Form of a Product From an Inactive Precursor Form. 
    32776   DNA Methylation On Cytosine  The Covalent Transfer of a Methyl Group to C 5 or N 4 of Cytosine in a DNA Molecule. 
    34080   Cenp a Containing Nucleosome Assembly  The Formation of Nucleosomes Containing the Histone H3 Variant Cenp a to Form Centromeric Chromatin. This Specialised Chromatin Occurs At Centromeric Region in Point Centromeres and the Central Core in Modular Centromeres. 
    35574   Histone H4 K20 Demethylation  The Modification of Histone H4 by the Removal of a Methyl Group From Lysine At Position 20 of the Histone. 
    40029   Regulation of Gene Expression Epigenetic  Any Process That Modulates the Frequency Rate or Extent of Gene Expression; the Process Is Mitotically or Meiotically Heritable or Is Stably Self Propagated in the Cytoplasm of a Resting Cell and Does Not Entail a Change in DNA Sequence. 
    45653   Negative Regulation of Megakaryocyte Differentiation  Any Process That Stops Prevents or Reduces the Frequency Rate or Extent of Megakaryocyte Differentiation. 
    45814   Negative Regulation of Gene Expression Epigenetic  Any Epigenetic Process That Stops Prevents or Reduces the Rate of Gene Expression. 
    51290   Protein Heterotetramerization  The Formation of a Protein Heterotetramer a Macromolecular Structure Consisting of Four Noncovalently Associated Subunits of Which Not All Are Identical. 
    228   Nuclear Chromosome  A Chromosome Found in the Nucleus of a Eukaryotic Cell. 
    786   Nucleosome  A Complex Comprised of DNA Wound Around a Multisubunit Core and Associated Proteins Which Forms the Primary Packing Unit of DNA Into Higher Order Structures. 
    5576   Extracellular Region  The Space External to the Outermost Structure of a Cell. For Cells Without External Protective or External Encapsulating Structures This Refers to Space Outside of the Plasma Membrane. This Term Covers the Host Cell Environment Outside an Intracellular Parasite. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    5654   Nucleoplasm  That Part of the Nuclear Content Other Than the Chromosomes or the Nucleolus. 
    5694   Chromosome  A Structure Composed of a Very Long Molecule of DNA and Associated Proteins (e.g. Histones) That Carries Hereditary Information. 
    16020   Membrane  A Lipid Bilayer Along with All the Proteins and Protein Complexes Embedded in It an Attached to It. 
    43234   Protein Complex  A Stable Macromolecular Complex Composed (only) of Two or More Polypeptide Subunits Along with Any Covalently Attached Molecules (such As Lipid Anchors or Oligosaccharide) or Non Protein Prosthetic Groups (such As Nucleotides or Metal Ions). Prosthetic Group in This Context Refers to a Tightly Bound Cofactor. the Component Polypeptide Subunits May Be Identical. 
    70062   Extracellular Exosome  A Membrane Bounded Vesicle That Is Released Into the Extracellular Region by Fusion of the Limiting Endosomal Membrane of a Multivesicular Body with the Plasma Membrane. Extracellular Exosomes Also Simply Called Exosomes Have a Diameter of About 40 100 Nm. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 
    5515   Protein Binding  Interacting Selectively and Non Covalently with Any Protein or Protein Complex (a Complex of Two or More Proteins That May Include Other Nonprotein Molecules). 
    35575   Histone Demethylase Activity (h4 K20 Specific)  Catalysis of the Reaction: Histone H4 N6 Methyl L Lysine (position 20) + 2 Oxoglutarate + O2 = Histone H4 L Lysine (position 20) + Succinate + Formaldehyde + Co2. This Reaction Is the Removal of a Methyl Group From Lysine At Position 20 of the Histone H4 Protein. 
    42393   Histone Binding  Interacting Selectively and Non Covalently with a Histone Any of a Group of Water Soluble Proteins Found in Association with the DNA of Plant and Animal Chromosomes. They Are Involved in the Condensation and Coiling of Chromosomes During Cell Division and Have Also Been Implicated in Nonspecific Suppression of Gene Activity. 
    44822   Poly(a) RNA Binding  Interacting Non Covalently with a Poly(a) RNA a RNA Molecule Which Has a Tail of Adenine Bases. 
    46982   Protein Heterodimerization Activity  Interacting Selectively and Non Covalently with a Nonidentical Protein to Form a Heterodimer. 
    Chain C,G
    GO ID   Ontology GO Term Definition
    8285   Negative Regulation of Cell Proliferation  Any Process That Stops Prevents or Reduces the Rate or Extent of Cell Proliferation. 
    786   Nucleosome  A Complex Comprised of DNA Wound Around a Multisubunit Core and Associated Proteins Which Forms the Primary Packing Unit of DNA Into Higher Order Structures. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    5694   Chromosome  A Structure Composed of a Very Long Molecule of DNA and Associated Proteins (e.g. Histones) That Carries Hereditary Information. 
    70062   Extracellular Exosome  A Membrane Bounded Vesicle That Is Released Into the Extracellular Region by Fusion of the Limiting Endosomal Membrane of a Multivesicular Body with the Plasma Membrane. Extracellular Exosomes Also Simply Called Exosomes Have a Diameter of About 40 100 Nm. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 
    46982   Protein Heterodimerization Activity  Interacting Selectively and Non Covalently with a Nonidentical Protein to Form a Heterodimer. 
    Chain D,H
    GO ID   Ontology GO Term Definition
    2227   Innate Immune Response in Mucosa  Any Process of the Innate Immune Response That Takes Place in the Mucosal Tissues. 
    6325   Chromatin Organization  Any Process That Results in the Specification Formation or Maintenance of the Physical Structure of Eukaryotic Chromatin. 
    6334   Nucleosome Assembly  The Aggregation Arrangement and Bonding Together of a Nucleosome the Beadlike Structural Units of Eukaryotic Chromatin Composed of Histones and Dna. 
    19731   Antibacterial Humoral Response  An Immune Response Against Bacteria Mediated Through a Body Fluid. Examples of This Process Are the Antibacterial Humoral Responses in Mus Musculus and Drosophila Melanogaster. 
    42742   Defense Response to Bacterium  Reactions Triggered in Response to the Presence of a Bacterium That Act to Protect the Cell or Organism. 
    50830   Defense Response to Gram Positive Bacterium  Reactions Triggered in Response to the Presence of a Gram Positive Bacterium That Act to Protect the Cell or Organism. 
    786   Nucleosome  A Complex Comprised of DNA Wound Around a Multisubunit Core and Associated Proteins Which Forms the Primary Packing Unit of DNA Into Higher Order Structures. 
    788   Nuclear Nucleosome  A Complex Comprised of DNA Wound Around a Multisubunit Core and Associated Proteins Which Forms the Primary Packing Unit of DNA in the Nucleus Into Higher Order Structures. 
    5615   Extracellular Space  That Part of a Multicellular Organism Outside the Cells Proper Usually Taken to Be Outside the Plasma Membranes and Occupied by Fluid. 
    5634   Nucleus  A Membrane Bounded Organelle of Eukaryotic Cells in Which Chromosomes Are Housed and Replicated. in Most Cells the Nucleus Contains All of the Cell's Chromosomes Except the Organellar Chromosomes and Is the Site of RNA Synthesis and Processing. in Some Species or in Specialized Cell Types RNA Metabolism or DNA Replication May Be Absent. 
    5654   Nucleoplasm  That Part of the Nuclear Content Other Than the Chromosomes or the Nucleolus. 
    5694   Chromosome  A Structure Composed of a Very Long Molecule of DNA and Associated Proteins (e.g. Histones) That Carries Hereditary Information. 
    3677   DNA Binding  Any Molecular Function by Which a Gene Product Interacts Selectively and Non Covalently with DNA (deoxyribonucleic Acid). 
    46982   Protein Heterodimerization Activity  Interacting Selectively and Non Covalently with a Nonidentical Protein to Form a Heterodimer. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain D,H
    Common Name Human
    Scientific Name Homo sapiens  
    Gene h2b
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pHCE


    Chain C,G
    Common Name Human
    Scientific Name Homo sapiens  
    Gene h2a
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pHCE


    Chain B,F
    Common Name Human
    Scientific Name Homo sapiens  
    Gene h4
    Host Scientific Name Escherichia coli  
    Host Strain Jm109(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pET15b


    Chain A,E
    Common Name Human
    Scientific Name Homo sapiens  
    Gene h3.1
    Host Scientific Name Escherichia coli  
    Host Strain Bl21(de3)
    Host Vector Type Plasmid
    Host Plasmid Name pHCE


    Genome Information

    Chromosome Locus Gene ID Gene Name Symbol
    1 1q21.2 8370     histone cluster 2, H4a HIST2H4A    
    1 1q21 554313     histone cluster 2, H4b HIST2H4B    
    6 6p22.2 8350     histone cluster 1, H3a HIST1H3A    
    6 6p22.1 8351     histone cluster 1, H3d HIST1H3D    
    6 6p22.2 8352     histone cluster 1, H3c HIST1H3C    
    6 6p22.2 8353     histone cluster 1, H3e HIST1H3E    
    6 6p22.1 8354     histone cluster 1, H3i HIST1H3I    
    6 6p22.2 8355     histone cluster 1, H3g HIST1H3G    
    6 6p22.1 8356     histone cluster 1, H3j HIST1H3J    
    6 6p22.1 8357     histone cluster 1, H3h HIST1H3H    
    6 6p22.2 8358     histone cluster 1, H3b HIST1H3B    
    6 6p22.2 8968     histone cluster 1, H3f HIST1H3F    
    6 6p21.33 8294     histone cluster 1, H4i HIST1H4I    
    6 6p22.2 8359     histone cluster 1, H4a HIST1H4A    
    6 6p22.2 8360     histone cluster 1, H4d HIST1H4D    
    6 6p22.2 8361     histone cluster 1, H4f HIST1H4F    
    6 6p22.1 8362     histone cluster 1, H4k HIST1H4K    
    6 6p22.1 8363     histone cluster 1, H4j HIST1H4J    
    6 6p22.1 8364     histone cluster 1, H4c HIST1H4C    
    6 6p22.1 8365     histone cluster 1, H4h HIST1H4H    
    6 6p22.2 8366     histone cluster 1, H4b HIST1H4B    
    6 6p22.2 8367     histone cluster 1, H4e HIST1H4E    
    6 6p22.1 8368     histone cluster 1, H4l HIST1H4L    
    6 6p22.2 3012     histone cluster 1, H2ae HIST1H2AE    
    6 6p22.2 8335     histone cluster 1, H2ab HIST1H2AB    
    6 6p22.1 8970     histone cluster 1, H2bj HIST1H2BJ    
    12 12p12.3 121504     histone cluster 4, H4 HIST4H4    

    Single Nucleotide Polymorphisms (from LS-SNP database)

    SNP ID LsSnp Link dbSNP Link Chain PDB position Amino acid changes Secondary structure Solvent Accessibility Chromosome Chromosome position Ligand
    rs138951289 LS-SNP   dbSNP   A 43 P - > S Turn 101% (Exposed) 6 26225512
    rs138723860 LS-SNP   dbSNP   A 43 P - > S Turn 101% (Exposed) 6 26020847
    rs202025373 LS-SNP   dbSNP   A 51 I - > N Helix 0% (Buried) 6 26020872
    rs150574838 LS-SNP   dbSNP   A 57 S - > W Coil 22% (Intermediate) 6 26271440
    rs144238254 LS-SNP   dbSNP   A 58 T - > A Coil 20% (Intermediate) 6 26020892
    rs148016931 LS-SNP   dbSNP   A 60 L - > V Coil 21% (Intermediate) 6 26250653
    rs77404275 LS-SNP   dbSNP   A 64 K - > N Helix 49% (Exposed) 6 26197284
    rs148374002 LS-SNP   dbSNP   A 64 K - > N Helix 49% (Exposed) 6 26020912
    rs143364138 LS-SNP   dbSNP   A 66 P - > L Helix 4% (Buried) 6 26020917
    rs188573880 LS-SNP   dbSNP   A 66 P - > S Helix 4% (Buried) 6 26197280
    rs147504514 LS-SNP   dbSNP   A 67 F - > S Helix 0% (Buried) 6 26020920
    rs139443021 LS-SNP   dbSNP   A 69 R - > C Helix 41% (Exposed) 6 26271405
    rs146261649 LS-SNP   dbSNP   A 71 V - > M Helix 0% (Buried) 6 26271399
    rs200927302 LS-SNP   dbSNP   A 71 V - > L Helix 0% (Buried) 6 26250620
    rs149070402 LS-SNP   dbSNP   A 71 V - > L Helix 0% (Buried) 6 26045852
    rs138788484 LS-SNP   dbSNP   A 71 V - > L Helix 0% (Buried) 6 26225596
    rs138060838 LS-SNP   dbSNP   A 72 R - > Q Helix 39% (Exposed) 6 27858353
    rs146749677 LS-SNP   dbSNP   A 74 I - > V Helix 0% (Buried) 6 26197256
    rs202172292 LS-SNP   dbSNP   A 74 I - > V Helix 0% (Buried) 6 26020940
    rs142669882 LS-SNP   dbSNP   A 77 D - > N Turn 74% (Exposed) 6 26197247
    rs141552598 LS-SNP   dbSNP   A 80 T - > A Bend 63% (Exposed) 6 26271372
    rs200019525 LS-SNP   dbSNP   A 83 R - > H Beta Ladder 66% (Exposed) 6 26250583
    rs145571906 LS-SNP   dbSNP   A 86 S - > G Helix 72% (Exposed) 6 26020976
    rs146383921 LS-SNP   dbSNP   A 87 S - > A Helix 32% (Intermediate) 6 26225644
    rs112019742 LS-SNP   dbSNP   A 87 S - > F Helix 32% (Intermediate) 6 26020980
    rs200980656 LS-SNP   dbSNP   A 90 M - > V Helix 22% (Intermediate) 6 27778122
    rs202067024 LS-SNP   dbSNP   A 91 A - > V Helix 0% (Buried) 6 26225657
    rs139095388 LS-SNP   dbSNP   A 99 Y - > H Helix 4% (Buried) 6 26021015
    rs142221765 LS-SNP   dbSNP   A 99 Y - > N Helix 4% (Buried) 6 27839796
    rs138505335 LS-SNP   dbSNP   A 100 L - > W Helix 1% (Buried) 6 26271311
    rs200676364 LS-SNP   dbSNP   A 100 L - > V Helix 1% (Buried) 6 26250533
    rs201427664 LS-SNP   dbSNP   A 101 V - > L Helix 4% (Buried) 6 26021021
    rs144478168 LS-SNP   dbSNP   A 103 L - > F Helix 3% (Buried) 6 26250524
    rs139893026 LS-SNP   dbSNP   A 106 D - > V Helix 11% (Intermediate) 6 27778171
    rs144016889 LS-SNP   dbSNP   A 110 C - > G Helix 0% (Buried) 6 26250503
    rs149609255 LS-SNP   dbSNP   A 110 C - > S Helix 0% (Buried) 6 26225713
    rs144363194 LS-SNP   dbSNP   A 111 A - > T Helix 0% (Buried) 6 26225716
    rs200228685 LS-SNP   dbSNP   A 112 I - > V Helix 21% (Intermediate) 6 26045975
    rs202032296 LS-SNP   dbSNP   A 114 A - > S Turn 13% (Intermediate) 6 26031946
    rs146760308 LS-SNP   dbSNP   A 116 R - > H Coil 20% (Intermediate) 6 26021067
    rs143514669 LS-SNP   dbSNP   A 116 R - > C Coil 20% (Intermediate) 6 26021066
    rs142670361 LS-SNP   dbSNP   A 119 I - > V Beta Ladder 0% (Buried) 6 26197121
    rs148426352 LS-SNP   dbSNP   A 120 M - > V Coil 29% (Intermediate) 6 26225743 CL
    rs41266785 LS-SNP   dbSNP   A 120 M - > I Coil 29% (Intermediate) 6 26046001 CL
    rs199573090 LS-SNP   dbSNP   A 124 I - > F Helix 2% (Buried) 6 26021090
    rs199943654 LS-SNP   dbSNP   A 125 Q - > P Helix 34% (Intermediate) 6 26021094
    rs61734000 LS-SNP   dbSNP   A 126 L - > F Helix 10% (Intermediate) 6 27858192
    rs199881140 LS-SNP   dbSNP   A 126 L - > V Helix 10% (Intermediate) 6 26031910
    rs150252598 LS-SNP   dbSNP   A 127 A - > G Helix 0% (Buried) 6 26271230
    rs141965015 LS-SNP   dbSNP   B 27 Q - > L 3/10 Helix 55% (Exposed) 6 27841206
    rs184771900 LS-SNP   dbSNP   B 28 G - > S 3/10 Helix 18% (Intermediate) 6 26104260
    rs148131091 LS-SNP   dbSNP   B 29 I - > T Bend 0% (Buried) 6 27841200
    rs202183795 LS-SNP   dbSNP   B 30 T - > A Coil 19% (Intermediate) 6 26240744
    rs202049591 LS-SNP   dbSNP   B 31 K - > Q Helix 51% (Exposed) 6 26189211
    rs41266819 LS-SNP   dbSNP   B 31 K - > R Helix 51% (Exposed) 6 26240748
    rs201894000 LS-SNP   dbSNP   B 32 P - > L Helix 48% (Exposed) 6 26189207
    rs200478043 LS-SNP   dbSNP   B 33 A - > V Helix 0% (Buried) 6 26027380
    rs181114978 LS-SNP   dbSNP   B 34 I - > L Helix 0% (Buried) 6 26285625
    rs200857174 LS-SNP   dbSNP   B 35 R - > L Helix 30% (Intermediate) 6 27841182
    rs141729612 LS-SNP   dbSNP   B 35 R - > C Helix 30% (Intermediate) 12 14923913
    rs201381816 LS-SNP   dbSNP   B 39 R - > W Helix 1% (Buried) 6 26022024
    rs201318128 LS-SNP   dbSNP   B 52 E - > D Helix 54% (Exposed) 6 26189146
    rs148045723 LS-SNP   dbSNP   B 52 E - > Q Helix 54% (Exposed) 12 14923862
    rs147907725 LS-SNP   dbSNP   B 53 E - > D Helix 28% (Intermediate) 6 26027319
    rs148995564 LS-SNP   dbSNP   B 53 E - > K Helix 28% (Intermediate) 6 27841129
    rs143307191 LS-SNP   dbSNP   B 54 T - > A Helix 1% (Buried) 6 26027318
    rs149158970 LS-SNP   dbSNP   B 54 T - > I Helix 1% (Buried) 6 26027317
    rs200159567 LS-SNP   dbSNP   B 55 R - > C Helix 10% (Intermediate) 6 27107253
    rs146739153 LS-SNP   dbSNP   B 55 R - > C Helix 10% (Intermediate) 6 26240819
    rs140361782 LS-SNP   dbSNP   B 56 G - > E Helix 50% (Exposed) 6 27107257
    rs146790408 LS-SNP   dbSNP   B 56 G - > R Helix 50% (Exposed) 6 27841120
    rs201938912 LS-SNP   dbSNP   B 58 L - > R Helix 0% (Buried) 6 26027305
    rs202202685 LS-SNP   dbSNP   B 58 L - > F Helix 0% (Buried) 6 26027306
    rs139418296 LS-SNP   dbSNP   B 62 L - > R Helix 0% (Buried) 6 26027293
    rs139563717 LS-SNP   dbSNP   B 63 E - > K Helix 23% (Intermediate) 6 26027291
    rs141333633 LS-SNP   dbSNP   B 66 I - > T Helix 1% (Buried) 6 26205072
    rs149672595 LS-SNP   dbSNP   B 66 I - > T Helix 1% (Buried) 6 26189105
    rs201889588 LS-SNP   dbSNP   B 67 R - > S Helix 37% (Exposed) 6 26205074
    rs200288965 LS-SNP   dbSNP   B 69 A - > T Helix 1% (Buried) 6 26205080
    rs199660178 LS-SNP   dbSNP   B 74 E - > G Helix 43% (Exposed) 6 26205096
    rs143300286 LS-SNP   dbSNP   B 78 R - > P Coil 31% (Intermediate) 6 26022142
    rs150538742 LS-SNP   dbSNP   B 78 R - > L Coil 31% (Intermediate) 6 26189069
    rs199872319 LS-SNP   dbSNP   B 78 R - > C Coil 31% (Intermediate) 6 26285493
    rs116193614 LS-SNP   dbSNP   B 78 R - > H Coil 31% (Intermediate) 6 27107323
    rs11548889 LS-SNP   dbSNP   B 78 R - > H Coil 31% (Intermediate) 6 26285492
    rs113909556 LS-SNP   dbSNP   B 81 V - > A Beta Ladder 0% (Buried) 6 27799061
    rs199857326 LS-SNP   dbSNP   B 81 V - > A Beta Ladder 0% (Buried) 6 26022151
    rs144742137 LS-SNP   dbSNP   B 82 T - > I Coil 13% (Intermediate) 6 26189057
    rs150504596 LS-SNP   dbSNP   B 82 T - > I Coil 13% (Intermediate) 6 26027233
    rs200327357 LS-SNP   dbSNP   B 82 T - > I Coil 13% (Intermediate) 6 26104423
    rs147105535 LS-SNP   dbSNP   B 83 A - > V Helix 5% (Buried) 6 26022157
    rs145023904 LS-SNP   dbSNP   B 84 M - > T Helix 28% (Intermediate) 6 27841035
    rs189209822 LS-SNP   dbSNP   B 84 M - > K Helix 28% (Intermediate) 6 26205126
    rs138088561 LS-SNP   dbSNP   B 85 D - > G Helix 2% (Buried) 6 27107344
    rs201833445 LS-SNP   dbSNP   B 85 D - > G Helix 2% (Buried) 6 27841032
    rs148427340 LS-SNP   dbSNP   B 89 A - > V Helix 0% (Buried) 6 26027212
    rs144469714 LS-SNP   dbSNP   B 89 A - > S Helix 0% (Buried) 6 26104443
    rs199563791 LS-SNP   dbSNP   B 91 K - > R Helix 39% (Exposed) 6 26205147
    rs200412707 LS-SNP   dbSNP   B 92 R - > H Helix 26% (Intermediate) 6 27841011
    rs201947121 LS-SNP   dbSNP   B 92 R - > S Helix 26% (Intermediate) 6 27799029
    rs143646853 LS-SNP   dbSNP   B 97 L - > V Beta Ladder 0% (Buried) 6 27107379
    rs201783122 LS-SNP   dbSNP   B 100 F - > S Bend 21% (Intermediate) 12 14923717
    rs151068394 LS-SNP   dbSNP   B 102 G - > D Coil 20% (Intermediate) 6 26240961
    rs45526033 LS-SNP   dbSNP   B 102 G - > S Coil 20% (Intermediate) 6 27840982
    rs150512259 LS-SNP   dbSNP   C 12 A - > T Coil 93% (Exposed) 6 26033760
    rs188283398 LS-SNP   dbSNP   C 13 K - > N Coil 90% (Exposed) 6 26217244
    rs202110121 LS-SNP   dbSNP   C 16 T - > A Coil 63% (Exposed) 6 26033748
    rs200509507 LS-SNP   dbSNP   C 19 S - > Y Helix 42% (Exposed) 6 26217261
    rs200253591 LS-SNP   dbSNP   C 20 R - > H Helix 36% (Intermediate) 6 26033735
    rs145310776 LS-SNP   dbSNP   C 25 F - > Y Bend 0% (Buried) 6 26033720
    rs138437314 LS-SNP   dbSNP   C 35 R - > H Helix 56% (Exposed) 6 26033690
    rs145791004 LS-SNP   dbSNP   C 41 E - > Q Bend 76% (Exposed) 6 26033673
    rs145843332 LS-SNP   dbSNP   C 44 G - > R Coil 20% (Intermediate) 6 26033664 CL
    rs201159814 LS-SNP   dbSNP   C 45 A - > S Bend 53% (Exposed) 6 26033661 CL
    rs45579941 LS-SNP   dbSNP   C 70 A - > P Helix 0% (Buried) 6 26217413
    rs139976301 LS-SNP   dbSNP   C 73 N - > K Turn 48% (Exposed) 6 26033575
    rs202245482 LS-SNP   dbSNP   C 76 T - > A Bend 68% (Exposed) 6 26033568
    rs200934836 LS-SNP   dbSNP   C 85 L - > V Helix 23% (Intermediate) 6 26217458
    rs148691705 LS-SNP   dbSNP   C 93 L - > P Helix 0% (Buried) 6 26033516
    rs115796933 LS-SNP   dbSNP   D 30 K - > R Coil 118% (Exposed) 6 27100438
    rs137867381 LS-SNP   dbSNP   D 32 S - > T Coil 79% (Exposed) 6 27100432
    rs140265793 LS-SNP   dbSNP   D 58 A - > T Helix 0% (Buried) 6 27100355
    rs116071754 LS-SNP   dbSNP   D 61 I - > V Helix 4% (Buried) 6 27100346
    rs142947459 LS-SNP   dbSNP   D 67 N - > K Helix 50% (Exposed) 6 27100326
    rs116395770 LS-SNP   dbSNP   D 92 R - > K Helix 31% (Intermediate) 6 27100252
    rs114646640 LS-SNP   dbSNP   D 102 L - > P Bend 6% (Buried) 6 27100222
    rs115254614 LS-SNP   dbSNP   D 115 T - > I Helix 39% (Exposed) 6 27100183