POP-OUT | CLOSE

An Information Portal to 106858 Biological Macromolecular Structures

Crystal structure of a mutant binding protein (5HTBP-AChBP) in complex with granisetron
Biology and Chemistry Report
2YME
  •   Structure Details   Hide

    Structure Keywords

    Keywords RECEPTOR
    Text RECEPTOR, PENTAMERIC LIGAND-GATED ION CHANNEL

    Polymeric Molecules

    Chain A,B,C,D,E,F,G,H,I,J
    Description SOLUBLE ACETYLCHOLINE RECEPTOR 
    Fragment ACETYLCHOLINE BINDING DOMAIN, RESIDUES 20-224 
    Mutation YES 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 23343.3 
    Source Method genetically manipulated  
    Entity Name ACHBP 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    CWB  1-methyl-N-[(1R,5S)-9-methyl-9-azabicyclo[3.3.1]nonan-3-yl]indazole-3-carboxamide  C18 H24 N4 O   312.41  View 
    NA  SODIUM ION  Na   22.99  View 
    NAG  N-ACETYL-D-GLUCOSAMINE  C8 H15 N O6   221.21  View 
    PO4  PHOSPHATE ION  O4 P   94.97  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C,D,E,F,G,H,I,J Q8WSF8_APLCA Q8WSF8     

    Keywords and Names

    Chain(s) RCSB Name UniProtKB Name UniProtKB Keywords

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C,D,E,F,G,H,I,J
    GO ID   Ontology GO Term Definition
    6810   Transport  The Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells or Within a Multicellular Organism by Means of Some Agent Such As a Transporter or Pore. 
    6811   Ion Transport  The Directed Movement of Charged Atoms or Small Charged Molecules Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. 
    16020   Membrane  Double Layer of Lipid Molecules That Encloses All Cells and in Eukaryotes Many Organelles; May Be a Single or Double Lipid Bilayer; Also Includes Associated Proteins. 
    16021   Integral Component of Membrane  The Component of a Membrane Consisting of Gene Products and Protein Complexes That Have Some Part That Penetrates At Least One Leaflet of the Membrane Bilayer. This Component Includes Gene Products That Are Buried in the Bilayer with No Exposure Outside the Bilayer. 
    5230   Extracellular Ligand Gated Ion Channel Activity  Catalysis of the Transmembrane Transfer of an Ion by a Channel That Opens When a Specific Extracellular Ligand Has Been Bound by the Channel Complex or One of Its Constituent Parts. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C,D,E,F,G,H,I,J
    Common Name California Sea Hare
    Scientific Name Aplysia californica  
    Host Common Name Fall Armyworm
    Host Scientific Name Spodoptera frugiperda  
    Host Strain Sf21
    Host Vector Pfastbac
    Host Vector Type Plasmid