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An Information Portal to 109093 Biological Macromolecular Structures

Crystal structure of a mutant binding protein (5HTBP-AChBP) in complex with serotonin (5-hydroxytryptamine)
Biology and Chemistry Report
2YMD
  •   Structure Details   Hide

    Structure Keywords

    Keywords RECEPTOR
    Text RECEPTOR, PENTAMERIC LIGAND-GATED ION CHANNEL

    Polymeric Molecules

    Chain A,B,C,D,E,F,G,H,I,J
    Description SOLUBLE ACETYLCHOLINE RECEPTOR 
    Fragment ACETYLCHOLINE BINDING DOMAIN, RESIDUES 20-231 
    Mutation YES 
    Nonstandard Linkage no 
    Nonstandard Monomers no 
    Polymer Type polypeptide(L) 
    Formula Weight 24093.1 
    Source Method genetically manipulated  
    Entity Name ACHBP 

    Ligands and Prosthetic Groups

    ID Name Chemical Formula Weight Ligand Structure
    GOL  GLYCEROL  C3 H8 O3   92.09  View 
    PO4  PHOSPHATE ION  O4 P   94.97  View 
    SRO  SEROTONIN  C10 H12 N2 O   176.22  View 
     
  •   Protein Details   Hide

    UniProtKB Information

    Chain SWS/UNP ID SWS/UNP Accession(s)
    A,B,C,D,E,F,G,H,I,J Q8WSF8_APLCA Q8WSF8     

    C: Cellular Location | F: Molecular Function | P: Biological Process
    Chain A,B,C,D,E,F,G,H,I,J
    GO ID   Ontology GO Term Definition
    6810   Transport  The Directed Movement of Substances (such As Macromolecules Small Molecules Ions) Into Out of or Within a Cell or Between Cells or Within a Multicellular Organism by Means of Some Agent Such As a Transporter or Pore. 
    6811   Ion Transport  The Directed Movement of Charged Atoms or Small Charged Molecules Into Out of or Within a Cell or Between Cells by Means of Some Agent Such As a Transporter or Pore. 
    34220   Ion Transmembrane Transport  A Process in Which an Ion Is Transported From One Side of a Membrane to the Other by Means of Some Agent Such As a Transporter or Pore. 
    16020   Membrane  A Lipid Bilayer Along with All the Proteins and Protein Complexes Embedded in It an Attached to It. 
    16021   Integral Component of Membrane  The Component of a Membrane Consisting of Gene Products and Protein Complexes That Have Some Part That Penetrates At Least One Leaflet of the Membrane Bilayer. This Component Includes Gene Products That Are Buried in the Bilayer with No Exposure Outside the Bilayer. 
    5230   Extracellular Ligand Gated Ion Channel Activity  Enables the Transmembrane Transfer of an Ion by a Channel That Opens When a Specific Extracellular Ligand Has Been Bound by the Channel Complex or One of Its Constituent Parts. 
    46872   Metal Ion Binding  Interacting Selectively and Non Covalently with Any Metal Ion. 


     
  •   Gene Details   Hide

    Genetic Source

    Chain A,B,C,D,E,F,G,H,I,J
    Common Name California Sea Hare
    Scientific Name Aplysia californica  
    Host Common Name Fall Armyworm
    Host Scientific Name Spodoptera frugiperda  
    Host Strain Sf21
    Host Vector Pfastbac
    Host Vector Type Plasmid